New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? BX571858 1 =0 (0.000)259 (1.150) 122/170 NT 100% intergenic (–/‑11) –/pSAS01 –/putative ABC transporter ATP binding protein
?BX571858 = 20651 0 (0.000)intergenic (+5/–) pSAS24/– putative exported protein/–

Only 100 of 293 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGAAAAT  >  BX571858/1‑96
                                                                                                |                                                                                               
gatcctacaaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgag                                                                                                 <  1:3384291‑M1/1‑1 (MQ=255)
  tcctacaaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGt                                                                                               >  1:1860766‑M1/95‑97 (MQ=255)
   cctacaaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTg                                                                                              >  2:1731504‑M1/94‑97 (MQ=255)
    ctacaaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGa                                                                                             <  1:1901814‑M1/5‑1 (MQ=255)
    ctacaaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGa                                                                                             >  2:3199228‑M1/93‑97 (MQ=255)
    ctacaaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGa                                                                                             >  2:2708569‑M1/93‑97 (MQ=255)
       caaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCg                                                                                          <  1:1040489‑M1/8‑1 (MQ=255)
         aaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGAt                                                                                        <  2:3379721‑M1/10‑1 (MQ=255)
         aaagaataagtgaaagtaaatcatacagggaaatatgtgcgttcgatagaatacattacaaaacatatccctagcattataaaatgaGCTGCCCgaa                                                                                        <  2:2014555‑M1/10‑2 (MQ=255)
           agaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAg                                                                                      <  2:1017216‑M1/12‑1 (MQ=255)
           agaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAg                                                                                      <  2:1077982‑M1/12‑1 (MQ=255)
            gaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGt                                                                                     >  2:955327‑M1/85‑97 (MQ=255)
             aatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTg                                                                                    <  1:142708‑M1/14‑1 (MQ=255)
             aatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTg                                                                                    <  1:2875878‑M1/14‑1 (MQ=255)
              atatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGa                                                                                   <  2:1697362‑M1/15‑1 (MQ=255)
              atatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGa                                                                                   <  1:1002311‑M1/15‑1 (MQ=255)
              atatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGa                                                                                   <  1:3230766‑M1/15‑1 (MQ=255)
               tatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGAt                                                                                  <  2:2601014‑M1/16‑1 (MQ=255)
               tatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGAt                                                                                  >  1:753549‑M1/82‑97 (MQ=255)
                 tgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATaa                                                                                <  1:2453785‑M1/18‑1 (MQ=255)
                   tgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATaaaa                                                                              <  1:2515410‑M1/20‑1 (MQ=255)
                   tgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATaaaa                                                                              <  2:2184024‑M1/20‑1 (MQ=255)
                      aagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACtt                                                                           <  1:3335149‑M1/23‑1 (MQ=255)
                       agtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTg                                                                          <  2:1280704‑M1/24‑1 (MQ=255)
                        gtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGa                                                                         >  2:2368761‑M1/73‑97 (MQ=255)
                         taaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGaa                                                                        >  2:3561941‑M1/72‑97 (MQ=255)
                         taaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGaa                                                                        >  1:1379299‑M1/72‑97 (MQ=255)
                           aatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGaaaa                                                                      >  1:3440075‑M1/70‑97 (MQ=255)
                             tcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATg                                                                    <  1:628698‑M1/30‑1 (MQ=255)
                             tcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATg                                                                    <  2:3314806‑M1/30‑1 (MQ=255)
                              cataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGt                                                                   <  1:1758085‑M1/31‑1 (MQ=255)
                              cataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGt                                                                   <  1:3150395‑M1/31‑1 (MQ=255)
                               ataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtt                                                                  <  1:544053‑M1/32‑1 (MQ=255)
                               ataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtt                                                                  >  1:2533817‑M1/66‑97 (MQ=255)
                               ataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtt                                                                  <  1:2686617‑M1/32‑1 (MQ=255)
                               ataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtt                                                                  >  1:3310245‑M1/66‑97 (MQ=255)
                               acaaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtt                                                                  <  2:2079139‑M1/32‑1 (MQ=255)
                                 aaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtttt                                                                >  2:3076029‑M1/64‑97 (MQ=255)
                                 aaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtttt                                                                >  1:2668054‑M1/64‑97 (MQ=255)
                                  aagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGttttt                                                               <  2:3454531‑M1/35‑1 (MQ=255)
                                    gggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGt                                                             >  2:1411839‑M1/61‑97 (MQ=255)
                                     ggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTa                                                            >  1:1145533‑M1/60‑97 (MQ=255)
                                     ggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTa                                                            >  1:157878‑M1/60‑97 (MQ=255)
                                      gaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTaa                                                           <  1:2980974‑M1/39‑1 (MQ=255)
                                      gaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGATTTTGTaa                                                           <  1:708622‑M1/39‑1 (MQ=255)
                                       aaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTaaa                                                          <  1:2590086‑M1/40‑1 (MQ=255)
                                       aaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTaaa                                                          >  1:1472415‑M1/58‑97 (MQ=255)
                                        aatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTaaaa                                                         <  1:2726949‑M1/41‑1 (MQ=255)
                                         atatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTaaaaa                                                        <  1:2933774‑M1/42‑1 (MQ=255)
                                          tatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTaaaaaa                                                       <  2:464824‑M1/43‑1 (MQ=255)
                                          tatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTaaaaaa                                                       >  1:10267‑M1/55‑97 (MQ=255)
                                           atgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTaaaaaaa                                                      <  2:894323‑M1/44‑1 (MQ=255)
                                             gtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAgg                                                    >  1:2227968‑M1/52‑97 (MQ=255)
                                                   tcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGtaataa                                              >  2:1933287‑M1/46‑97 (MQ=255)
                                                    cgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATaaa                                             <  2:631279‑M1/53‑1 (MQ=255)
                                                    cgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATaaa                                             <  2:3397797‑M1/53‑1 (MQ=255)
                                                    cgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATaaa                                             <  1:603377‑M1/53‑1 (MQ=255)
                                                         gaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACAt                                        <  1:2190326‑M1/58‑1 (MQ=255)
                                                         gaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACAt                                        <  1:1127684‑M1/58‑1 (MQ=255)
                                                          aatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAACAAAAGGTAATAAAAACAtt                                       <  1:3547297‑M1/59‑1 (MQ=255)
                                                             acattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTa                                    <  2:1788211‑M1/62‑1 (MQ=255)
                                                              cattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAg                                   >  2:2755156‑M1/35‑97 (MQ=255)
                                                              cattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAg                                   <  2:2248650‑M1/63‑1 (MQ=255)
                                                              cattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAg                                   <  1:1504558‑M1/63‑1 (MQ=255)
                                                              cattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAg                                   >  1:2809598‑M1/35‑97 (MQ=255)
                                                               attacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGa                                  >  1:1965853‑M1/34‑97 (MQ=255)
                                                               attacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGa                                  <  2:2143299‑M1/64‑1 (MQ=255)
                                                               attacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGa                                  >  1:862254‑M1/34‑97 (MQ=255)
                                                                ttacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGAc                                 <  1:2352649‑M1/65‑1 (MQ=255)
                                                                 tacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACg                                <  2:130754‑M1/66‑1 (MQ=255)
                                                                  acaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACgg                               <  2:820942‑M1/67‑1 (MQ=255)
                                                                  acaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACgg                               >  1:981321‑M1/31‑97 (MQ=255)
                                                                  acaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACgg                               <  2:1129378‑M1/67‑1 (MQ=255)
                                                                    aaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGAt                             <  1:396679‑M1/69‑1 (MQ=255)
                                                                     aaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATg                            <  1:1853646‑M1/70‑1 (MQ=255)
                                                                     aaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATg                            <  2:1599347‑M1/70‑1 (MQ=255)
                                                                     aaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATg                            <  2:727186‑M1/70‑1 (MQ=255)
                                                                      aagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGt                           >  2:2973563‑M1/27‑97 (MQ=255)
                                                                       agatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTa                          <  1:2711487‑M1/72‑1 (MQ=255)
                                                                        gatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTaa                         >  1:790665‑M1/25‑97 (MQ=255)
                                                                        gatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTaa                         >  2:186700‑M1/25‑97 (MQ=255)
                                                                        gatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTaa                         <  2:531668‑M1/73‑1 (MQ=255)
                                                                        gatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTaa                         <  2:1003734‑M1/73‑1 (MQ=255)
                                                                         atattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAAc                        >  1:2119239‑M1/24‑97 (MQ=255)
                                                                         atattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAAc                        >  2:1542012‑M1/24‑97 (MQ=255)
                                                                         atattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAAc                        <  2:2782039‑M1/74‑1 (MQ=255)
                                                                           attcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACtt                      >  1:1256932‑M1/22‑97 (MQ=255)
                                                                            ttcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACttt                     <  1:1332330‑M1/77‑1 (MQ=255)
                                                                            ttcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACttt                     <  2:287316‑M1/77‑1 (MQ=255)
                                                                             tcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTa                    >  1:307326‑M1/20‑97 (MQ=255)
                                                                                 agctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAAttt                <  1:891217‑M1/82‑1 (MQ=255)
                                                                                    tttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGa             <  2:585535‑M1/85‑1 (MQ=255)
                                                                                    tttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGa             <  2:1459170‑M1/85‑1 (MQ=255)
                                                                                    tttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGa             >  1:2761413‑M1/13‑97 (MQ=255)
                                                                                      tttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGaaa           <  2:3136516‑M1/87‑1 (MQ=255)
                                                                                       ttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGaaaa          <  1:1641215‑M1/88‑1 (MQ=255)
                                                                                            atgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGaa     >  2:3513923‑M1/5‑97 (MQ=255)
                                                                                            atgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGaa     >  2:594635‑M1/5‑97 (MQ=255)
                                                                                            atgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGaa     >  1:3345334‑M1/5‑97 (MQ=255)
                                                                                            atgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGaa     >  1:3492509‑M1/5‑97 (MQ=255)
                                                                                                |                                                                                               
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGAAAAT  >  BX571858/1‑96

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.