New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? BX571857 = 1827674228 (1.030)3 (0.020) 3/140 NT 1.6% coding (4984/6561 nt) SAS1682 putative surface anchored protein
?BX571857 1828188 = 192 (1.070)coding (4470/6561 nt) SAS1682 putative surface anchored protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 325 total aligned reads displayed.

TATCAATAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGATTTGTATTTTC  >  BX571857/1827578‑1827770
                                                                                                |                                                                                                
tATCAATAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGC                                                                                                  >  2:3476397‑M1/1‑97 (MQ=255)
 aTCAATAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCa                                                                                                 >  1:1285528/1‑97 (MQ=255)
 aTCAATAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCa                                                                                                 <  1:3242388/97‑1 (MQ=255)
 aTCAATAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCa                                                                                                 >  1:1430122/1‑97 (MQ=255)
  tCAATAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAg                                                                                                <  2:391274/97‑1 (MQ=255)
   cAATAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGc                                                                                               >  1:3575512/1‑97 (MQ=255)
    aaTAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCt                                                                                              >  1:468772/1‑97 (MQ=255)
    aaTAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCt                                                                                              >  1:361279/1‑97 (MQ=255)
    aaTAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCt                                                                                              >  1:2020129/1‑97 (MQ=255)
        gCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGtt                                                                                          >  2:884694/1‑97 (MQ=255)
        gCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGtt                                                                                          >  1:829324/1‑97 (MQ=255)
            cATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACg                                                                                      <  1:1876876/97‑1 (MQ=255)
             aTCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTAGCAAGCGCAGCTCGTTTACGt                                                                                     <  2:2471897/97‑1 (MQ=255)
              tctcTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTc                                                                                    >  1:2720229/1‑97 (MQ=255)
               ctctTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCt                                                                                   >  1:1409142/1‑97 (MQ=255)
                tctTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCtt                                                                                  >  2:2780563/1‑97 (MQ=255)
                 ctTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTa                                                                                 <  1:1963710/97‑1 (MQ=255)
                  tttCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTAc                                                                                <  2:2047330/97‑1 (MQ=255)
                  tttCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTAc                                                                                <  1:2519108/97‑1 (MQ=255)
                    tCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACtt                                                                              <  2:3216512/97‑1 (MQ=255)
                     cATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACttt                                                                             >  1:2974147/1‑97 (MQ=255)
                     cATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACttt                                                                             >  2:1284659/1‑97 (MQ=255)
                     cATCTTGAGTAGTATCCAACGTAGTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCCATGCTATCAAGCGCAGCTCGTTTACGTCTTACttt                                                                             >  2:1507226/1‑97 (MQ=255)
                      aTCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTa                                                                            >  2:50788/1‑97 (MQ=255)
                          tGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGtt                                                                        >  2:48906/1‑97 (MQ=255)
                           gAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGttt                                                                       <  1:658675/97‑1 (MQ=255)
                            agtagtATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGtttt                                                                      >  1:1364018/1‑97 (MQ=255)
                             gtagtaTCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTa                                                                     <  2:449608/97‑1 (MQ=255)
                               agtaTCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTAtt                                                                   >  1:773805/1‑97 (MQ=255)
                               agtaTCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTAtt                                                                   <  1:1587723/97‑1 (MQ=255)
                                gtaTCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTCTTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTAttt                                                                  <  1:1665368/97‑1 (MQ=255)
                                  aTCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGc                                                                >  1:1134834/1‑97 (MQ=255)
                                    ccAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTc                                                              <  1:1696987/97‑1 (MQ=255)
                                     cAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCGATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCa                                                             <  1:3115697/97‑1 (MQ=255)
                                     cAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCa                                                             <  1:3285852/97‑1 (MQ=255)
                                       aCGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAAt                                                           <  1:2678540/97‑1 (MQ=255)
                                       aCGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAAt                                                           <  1:1737266/97‑1 (MQ=255)
                                         gTATTTCGGTTTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTg                                                         <  1:2202212/97‑1 (MQ=255)
                                         gTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTg                                                         <  1:2402215/97‑1 (MQ=255)
                                         gTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTg                                                         >  2:1639665/1‑97 (MQ=255)
                                              tCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTg                                                    <  2:1957442/97‑1 (MQ=255)
                                              tCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTg                                                    >  1:3654570/1‑97 (MQ=255)
                                                  aTTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTg                                                <  1:67182/97‑1 (MQ=255)
                                                   ttGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGt                                               >  1:871092/1‑97 (MQ=255)
                                                   ttGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGAAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGt                                               >  2:2834594/1‑97 (MQ=255)
                                                      cATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTg                                            <  2:2224791/97‑1 (MQ=255)
                                                        tCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTTCTCAATTGCCTTGATTGTTTGAt                                          >  2:2521950/1‑97 (MQ=255)
                                                        tCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGAt                                          <  1:2947147/97‑1 (MQ=255)
                                                         cGAGTTGTTTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGAtt                                         <  1:2841287/97‑1 (MQ=255)
                                                         cGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTgtttgttt                                         >  2:1171371/1‑97 (MQ=255)
                                                          gAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGAttt                                        >  1:3355059/1‑97 (MQ=255)
                                                            gTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCt                                      >  2:1993657/1‑97 (MQ=255)
                                                            gTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCt                                      <  1:2090458/97‑1 (MQ=255)
                                                              tGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTaa                                    >  1:105616/1‑97 (MQ=255)
                                                                  ttttATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATc                                <  1:442138/97‑1 (MQ=255)
                                                                  ttttATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATc                                <  2:3315413/97‑1 (MQ=255)
                                                                   tttCTTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTCTCTTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCa                               >  2:2670205/1‑97 (MQ=255)
                                                                   tttATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTACCATCa                               >  2:808408/1‑97 (MQ=255)
                                                                   tttATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCa                               >  2:1098497/1‑97 (MQ=255)
                                                                   tttATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCa                               >  2:3578341/1‑97 (MQ=255)
                                                                   tttATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCa                               <  2:745101/97‑1 (MQ=255)
                                                                    ttattaTTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAg                              <  1:503280/97‑1 (MQ=255)
                                                                         attTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAAca                         >  1:1450241/1‑97 (MQ=255)
                                                                         attTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAAca                         >  2:557116/1‑97 (MQ=255)
                                                                           tttCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAAcagc                       <  2:2951360/97‑1 (MQ=255)
                                                                           tttCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAAcagc                       <  2:2092390/97‑1 (MQ=255)
                                                                              cttcAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACagcagc                    <  2:2288882/97‑1 (MQ=255)
                                                                                 cAATGCTATCAAGCGCttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgat                 <  1:1495660‑M1/97‑82 (MQ=255)
                                                                                 cAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGCTTTCTAACCTCAGTAACAGCAGCATc                 >  2:703519/1‑97 (MQ=255)
                                                                                 cAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATc                 <  2:3151124/97‑1 (MQ=255)
                                                                                  aaTGCTATCAAGCGCttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgatt                >  2:2164999‑M1/1‑15 (MQ=255)
                                                                                  aaTGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCt                >  2:1803112/1‑97 (MQ=255)
                                                                                   aTGCTATCAAGCGCttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgattt               <  2:3376125‑M1/97‑84 (MQ=255)
                                                                                     gCTATCAAGCGCttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgatttta             >  1:1511941‑M1/1‑12 (MQ=255)
                                                                                     gCTATCAAGCGCttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgatttta             <  2:2633744‑M1/97‑86 (MQ=255)
                                                                                     gCTATCAAGCGCttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgatttta             >  2:1710447‑M1/1‑12 (MQ=255)
                                                                                     gCTATCAAGCGCttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgatttta             <  2:290337‑M1/97‑86 (MQ=255)
                                                                                     gCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCGCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGa             <  1:2371536/97‑1 (MQ=255)
                                                                                      cTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGAt            >  1:928820/1‑97 (MQ=255)
                                                                                      cTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGAt            >  1:1062650/1‑97 (MQ=255)
                                                                                      cTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGAt            >  1:1189246/1‑97 (MQ=255)
                                                                                       tATCAAGCGCttgacttgttgtatcatcaacttgatgatttgttctattattcgtaataactgtcatggcttgatttacaaattcatcgattttatc           >  2:1917623‑M1/1‑10 (MQ=255)
                                                                                        aTCAAGCGCttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgattttatct          >  2:1325239‑M1/1‑9 (MQ=255)
                                                                                         tCAAGCGCttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgattttatcta         >  1:3370957‑M1/1‑8 (MQ=255)
                                                                                          cAAGCGCttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgattttatctag        >  2:3405576‑M1/1‑7 (MQ=255)
                                                                                          cAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGATTTGt        <  1:611019/97‑1 (MQ=255)
                                                                                           aaGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGATTTGTa       >  2:3546748/1‑97 (MQ=255)
                                                                                           aaGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGATTTGTa       >  2:2740225/1‑97 (MQ=255)
                                                                                           aaGCGCAGCTCGTTTACGTCTTACCTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGATTGGTa       >  1:493834/1‑97 (MQ=255)
                                                                                            aGCGCttggcttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgattttatctagtg      <  1:1085646‑M1/97‑93 (MQ=255)
                                                                                            aGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGATTTGTAt      <  2:3132132/97‑1 (MQ=255)
                                                                                             gcgcttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgattttatctagtgc     <  1:3353082‑M1/97‑94 (MQ=255)
                                                                                              cgcttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgattttatctagtgct    >  2:1567775‑M1/1‑3 (MQ=255)
                                                                                              cgcttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgattttatctagtgct    <  1:3490100‑M1/97‑95 (MQ=255)
                                                                                              cgcAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGATTCGTAttt    >  2:2558221/1‑97 (MQ=255)
                                                                                               gcttgtcttgttgtatcatcaccttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgattttatctagtgcta   <  2:36868‑M1/97‑96 (MQ=255)
                                                                                               gcttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatgtgtcatggcttgatttacaaattcattgattttatctagtgcta   >  1:2663852‑M1/1‑2 (MQ=255)
                                                                                               gcttgacttgttgtatcatcaacttgttgatttgttctattattcgtaatatctgtcatggcttgatttacaaattcattgattttatctagtgcta   >  2:1265185‑M1/1‑2 (MQ=255)
                                                                                               gcAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGATTTGTAtttt   >  2:2410983/1‑97 (MQ=255)
                                                                                                cAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGATTTGTATTTTc  <  2:3081856/97‑1 (MQ=255)
                                                                                                |                                                                                                
TATCAATAGCAACATCTCTTTCATCTTGAGTAGTATCCAACGTATTTCGGATTGCATCGAGTTGATTTTTATTATTTTCTTCAATGCTATCAAGCGCAGCTCGTTTACGTCTTACTTTAGGTTTTATTTGCTCAATTGCCTTGATTGTTTGATTTCTAACATCAGTAACAGCAGCATCTTGATTTGTATTTTC  >  BX571857/1827578‑1827770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.