| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | BX571857 | 1,332,856 | 30 bp→TCGGTGGTCGCCGTATCATTAAAAAAAAAA | 15.8% | coding (185‑214/1239 nt) | SAS1239 → | conserved hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BX571857 | = 1332855 | 187 (0.670) | 24 (0.130) +TCGGTGGTCGCCGTATCATTAAAAAAAAAA |
19/112 | NT | 15.8% | coding (184/1239 nt) | SAS1239 | conserved hypothetical protein |
| ? | BX571857 | 1332886 = | 208 (0.750) | coding (215/1239 nt) | SAS1239 | conserved hypothetical protein | |||||
Only 100 of 240 total aligned reads displayed.
ATTTTGAGTCTACAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGAATGATGAATTAACG > BX571857/1332760‑1332950 | atttTGAGTCTACAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCg < 2:1747360/97‑1 (MQ=255) tttGAGTCTACAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCa < 1:3494371/97‑1 (MQ=255) ttGAGTCTACAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCaa < 2:2973366/97‑1 (MQ=255) tGAGTCTACAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACGGAGATCGTGTAGATCGCaaa < 2:117590/97‑1 (MQ=255) gTCTACAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAatat < 2:2151684/97‑1 (MQ=255) gTCTACAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAatat < 2:3902182/97‑1 (MQ=255) tCTACAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAAtatt > 1:3060350/1‑97 (MQ=255) cAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAATtgttacgg > 2:2853838/1‑94 (MQ=255) aTGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTg < 2:823699/97‑1 (MQ=255) aTGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTg < 2:3914452/97‑1 (MQ=255) tGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTgg < 2:2258769/97‑1 (MQ=255) tGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTgg > 2:337160/1‑97 (MQ=255) ggaggaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggt > 1:124520/1‑97 (MQ=255) ggaggaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggt > 1:1190141/1‑97 (MQ=255) ggaggaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggt > 1:410375/1‑97 (MQ=255) ggaggaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggt > 1:1215458/1‑97 (MQ=255) gaggaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAAGGTCATGTTggta > 2:1519020/1‑97 (MQ=255) aggaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaa > 1:332733/1‑97 (MQ=255) aggaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaa < 2:2069466/97‑1 (MQ=255) ggaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaa > 1:3960490/1‑97 (MQ=255) ggaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaa < 2:1860378/97‑1 (MQ=255) ggaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaa < 1:612403/97‑1 (MQ=255) gaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAGAGATTGTGGTggcaaag > 2:2650253/1‑97 (MQ=255) gaATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaag < 2:4486682/97‑1 (MQ=255) aaTTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaagg > 1:1146231/1‑97 (MQ=255) aTTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaaggt > 1:2887719/1‑97 (MQ=255) ttATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaaggta > 1:4191955/1‑97 (MQ=255) tATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaaggtaa > 1:2047445/1‑97 (MQ=255) tATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaaggtaa > 1:2690827/1‑97 (MQ=255) tATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAAGTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaaggtaa < 2:3192765/97‑1 (MQ=255) atcatcTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTggtaaaggtaaa < 1:1886328/97‑1 (MQ=255) tcatcTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTaaaa < 2:2747345/97‑1 (MQ=255) catcTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAAt < 1:1427675/97‑1 (MQ=255) atcTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATg > 1:1016673/1‑97 (MQ=255) atcTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATg < 1:4273073/97‑1 (MQ=255) tcTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATgg < 2:38224/97‑1 (MQ=255) tttATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGgaa > 1:973125/1‑97 (MQ=255) ttATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCgcggaggtcgcggtgtcataaataaaaagaaag > 2:449648‑M1/1‑64 (MQ=255) ttATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGgaag < 1:1608096/97‑1 (MQ=255) ttATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGgaag < 2:1353355/97‑1 (MQ=255) tATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGgaaga < 2:2032462/97‑1 (MQ=255) tATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGgaaga < 2:2106072/97‑1 (MQ=255) aTCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGgaagaa < 2:1788259/97‑1 (MQ=255) aTCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGgaagaa > 1:1846473/1‑97 (MQ=255) cAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAAt < 1:1458261/97‑1 (MQ=255) cAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAAt < 1:2606410/97‑1 (MQ=255) cAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAAt > 1:3652308/1‑97 (MQ=255) agagACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCtcggtggtcgccgtatcattaaaaaaaaaaaagaaact > 2:862377‑M1/1‑59 (MQ=255) agagACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAAtt > 1:859401/1‑97 (MQ=255) gagaCTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCgcggtggtcgccgtagcattaaaaaaaaagaagaaattc > 2:970295‑M1/1‑58 (MQ=255) gagaCTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTc < 1:2072007/97‑1 (MQ=255) gagaCTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTc < 2:2359609/97‑1 (MQ=255) gagaCTTGCCAACTTGAAGTGTTGGGTCAAATTACACAAAACAGAGATCGTGTAGACCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTc < 1:1795/97‑1 (MQ=255) gaCTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCaa < 2:2388625/97‑1 (MQ=255) gaCTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCaa > 1:654916/1‑97 (MQ=255) aCTTGCCAACTTGAAGTGTTGGGTCAAATTGCTCAAAACAGAGTGCGTGTAGATCGCAACTATTATGTTGGTAAAGGGAAAATGGAAGAAATTCAAg < 2:522309/97‑1 (MQ=255) aCTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAg < 2:2458992/97‑1 (MQ=255) cTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGc < 1:3144729/97‑1 (MQ=255) ttGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCgcggtggtcgcggtggcatagaaaaaaaggaagaaattcaagca > 2:1322049‑M1/1‑53 (MQ=255) tGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCAt > 1:278095/1‑97 (MQ=255) tGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCAt < 1:123527/97‑1 (MQ=255) ccAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGTAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCAttt < 2:3766306/97‑1 (MQ=255) ccAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCAttt < 2:3510743/97‑1 (MQ=255) cAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTa < 2:4395265/97‑1 (MQ=255) aaCTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTAt < 2:2816646/97‑1 (MQ=255) aCTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCtcggtggtcgccgtatcattaaaaaaaaaaaagaaataaaagccttcatt > 2:2787821‑M1/1‑47 (MQ=255) aCTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTAtt < 2:4614308/97‑1 (MQ=255) cTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTg < 2:562095/97‑1 (MQ=255) cTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTg < 2:2795828/97‑1 (MQ=255) ttGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGa > 1:2287641/1‑97 (MQ=255) tGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAg < 2:4138149/97‑1 (MQ=255) tGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAg < 1:4459569/97‑1 (MQ=255) gtTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCtcggtggtcgccgtatcattaaaaaaaaggaagaaattcaagcatttattgagctcaaa > 2:4134514‑M1/1‑38 (MQ=255) gtTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCaaa < 1:4648772/97‑1 (MQ=255) gtTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCaaa < 1:1752468/97‑1 (MQ=255) ttGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAg > 1:1089549/1‑97 (MQ=255) gggTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGat < 2:1124398/97‑1 (MQ=255) gTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGatat > 1:832532/1‑97 (MQ=255) tCAAATTACTCAAAACAGAGATCGTGTAGATCtcggtggtcgccgtatcattaaaaaaaaaaaagaaattcaagcatttattgagttcaaagatatt > 2:4399861‑M1/1‑32 (MQ=255) tCAAATTACTCAAAACAGAGATCGTGTAGATCGCGAAGATCGTGGTGGCAAAGGTAAAAAGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATAtt > 2:1920181/1‑97 (MQ=255) tCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATAtt < 2:4347812/97‑1 (MQ=255) tCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATAtt < 2:1690431/97‑1 (MQ=255) aaTTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGAt < 1:3251931/97‑1 (MQ=255) aTTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATg < 1:1024197/97‑1 (MQ=255) tCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGtc > 1:3904740/1‑97 (MQ=255) cAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGtca > 1:3641655/1‑97 (MQ=255) aaaaCAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGtcat < 1:525900/97‑1 (MQ=255) cAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACg < 1:337160/97‑1 (MQ=255) agagATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGa < 1:2103546/97‑1 (MQ=255) gaTCGTGTAGATCtcggtggtcgccgtatcattaaaaaaaaagaagaaattcaagcatttattgagttcaaagatattgatgtagtcatcacgaatg > 2:3078767‑M1/1‑13 (MQ=255) gaTCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGAatg < 1:2337716/97‑1 (MQ=255) gaTCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGAatg < 1:247701/97‑1 (MQ=255) gaTCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGAatg > 1:2639201/1‑97 (MQ=255) gaTCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGAatg < 2:2602065/97‑1 (MQ=255) gaTCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGAatg < 1:825976/97‑1 (MQ=255) cGTGTAGAGCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGAatgatg < 2:3655711/97‑1 (MQ=255) tAGATCtcggtggtcgccgtatcattaaaaaaaaaaaagaaattcaagcatttattgagttcaaagatattgatgtagtcatcacgaatgatgaatt > 2:4540100‑M1/1‑6 (MQ=255) tAGATCtcggtggtcgccgtatcattaaaaaaaaaaaagaaattcaagcatttattgagttcaaagatattgaggtagtcatcacgaatgatgaatt > 2:4243905‑M1/1‑6 (MQ=255) aGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGAATGATGAATTa > 2:1420616/1‑97 (MQ=255) aTCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGAATGATGAATTAAc > 1:2519248/1‑97 (MQ=255) | ATTTTGAGTCTACAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTACTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATGGAAGAAATTCAAGCATTTATTGAGTTCAAAGATATTGATGTAGTCATCACGAATGATGAATTAACG > BX571857/1332760‑1332950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |