| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6009165 = | 20 (0.460) | 14 (0.430) | 10/200 | 2.4 | 62.2% | intergenic (+6/+76) | norM/PP_5263 | multidrug resistance protein NorM/GGDEF domain‑containing protein |
| ? | NC_002947 | 6009242 = | 2 (0.060) | coding (1667/1668 nt) | PP_5263 | GGDEF domain‑containing protein | |||||
ACCAGGTGCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6009341‑6009165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACTC > NC_002947/6009242‑6009382 ACCAGGTGCAAGGCCTACTGGTCAGCAGACCGCTACCGATAGGGGAATTTATGGCGTATTTGCTGCAGGCGCCTGGTCGCCAGTGGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTG < 1:82340/150‑1 AAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGC < 1:538464/150‑1 GGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACA‑GGATTGCGCGGTCCCTGTGGGAGCGGGCGT < 1:496380/150‑1 CCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGC > 2:72695/1‑120 CCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGC < 1:72695/120‑1 GATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGT < 2:699/112‑1 GATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGT > 1:699/1‑112 GATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGC < 1:811095/110‑1 GATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGC > 2:811095/1‑110 ATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGT > 2:188375/1‑111 ATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGT < 1:188375/111‑1 GCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCGAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTT > 2:845215/1‑150 CCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGC > 1:605077/1‑150 CCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGC > 1:95330/1‑150 CCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGG > 1:619198/1‑78 CCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGG < 2:619198/78‑1 GCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCG > 1:789479/1‑78 GCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCG < 2:789479/78‑1 TCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCT > 2:594239/1‑150 TCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGC < 1:55565/78‑1 TCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGC > 2:55565/1‑78 CCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTG < 1:594239/150‑1 CCACATGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGG > 2:509759/1‑150 CCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGG > 1:104389/1‑150 CCACAGGGACCACGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGG > 2:881628/1‑150 GCGTGCCCGCGAAGAGGCCCTAAAGGACACGATACAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATTAATTCACCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCTAAACCCGCGCAACAACGTCAGCT > 1:1014665/1‑150 CCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCT < 2:104389/150‑1 CGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCAC > 1:904036/1‑150 AAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCGAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACTC < 1:845215/150‑1 ACCAGGTGCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6009341‑6009165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACTC > NC_002947/6009242‑6009382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |