| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 209275 | NA (NA) | 6 (0.210) | 6/242 | NT | 21.0% | coding (14781/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | = 210616 | 23 (0.780) | coding (16122/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
AACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCGGACGTCGGTAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/209129‑209275‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGACCTTGACCAGGTCGCCTTCGTTGCCTGGGGTACCTGGCTCGTCGGTGACCGACGTGCTGACCGGCGTCTTGTCCAGCGTCAGTTGCTCGAACTTACCGACGTCCGCACCGCCAACGGTAGCGATCGACATCACGACAGGGTCGT < NC_002947/210616‑210468 AACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCGGACGTCGGTAAGTTCGAGCAACTGACACTCGACAAGACACCGGTCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGag > 1:373622/1‑148 ACTCGACAAAACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGTGACCTTGACCAGGTCGCCTTCGTT < 1:370473/88‑1 ACTCGACAAAACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGTGACCTTGACCAGGTCGCCTTCGTT > 2:370473/1‑88 GACAAAACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCTTGACCAGGTCGCC > 1:166015/1‑78 GACAAAACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAGGCGACCTTGACCAGGTCGCC < 2:166015/78‑1 aGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCTTCGTTGCCTGGGGTACCTGGCTCGTCGGTGACCGACGTGCTGACCGGCGTCTTGT < 1:234571/95‑1 aGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCTTCGTTGCCTGGGGTACCTGGCTCGTCGGTGACCGACGTGCTGACCGGCGTCTTGT > 2:234571/2‑96 AGGCGACCTGGTCAAGGTCACCATCGTTGCCTGGGGTACCTGGCTCGTCGGTGACCGACGTGCTGACCGGCGTCTTGTCCAGCGTCAGTTGCTCGAACTTACCGACGTCCGCACCGCCAACGGTAGCGATCGACATCACGACAGGGTCGT > 2:501937/1‑150 GGTGACCTTGACCAGGTCGCCTTCGTTGCCTGGGGTACCTGGCTCGTCGGTGACCGACGTGCTGAC > 1:40808/1‑66 GGTGACCTTGACCAGGTCGCCTTCGTTGCCTGGGGTACCTGGCTCGTCGGTGACCGACGTGCTGAC < 2:40808/66‑1 GGTGACCTTGACCAGGTCGCCTTCGTTGCCTGGGGTACCTGGCTCGTCGGTGACCGAC < 1:623114/58‑1 GGTGACCTTGACCAGGTCGCCTTCGTTGCCTGGGGTACCTGGCTCGTCGGTGACCGAC > 2:623114/1‑58 AACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCGGACGTCGGTAAGTTCGAGCAACTGACACTCGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGTACCCCAGGCAACGAAgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/209129‑209275‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGACCTTGACCAGGTCGCCTTCGTTGCCTGGGGTACCTGGCTCGTCGGTGACCGACGTGCTGACCGGCGTCTTGTCCAGCGTCAGTTGCTCGAACTTACCGACGTCCGCACCGCCAACGGTAGCGATCGACATCACGACAGGGTCGT < NC_002947/210616‑210468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |