New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 209275	NA (NA)	6 (0.210)	6/242	NT	21.0%	coding (14781/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 210616	23 (0.780)					coding (16122/26049 nt)	PP_0168	putative surface adhesion protein

ACGACCCTGTCGTGATGTCGATCGCTACCGTTGGCGGTGCGGACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCGTAC  >  NC_002947/210468‑210763                                                                                                                                                     |                                                                                                                                                    aCGACCCTGTCGTGATGTCGATCGCTACCGTTGGCGGTGCGGACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGATGGTGACCTTGACCAGGTCGCCt                                                                                                                                                    >  2:501937‑M2/1‑149 (MQ=255)                       cGCTACCGTTGGCGGTGCGGACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGt                                                                                                                              <  1:744662/150‑1 (MQ=255)                                 ggCGGTGCGGACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAAc                                                                                                                    <  1:230446/150‑1 (MQ=255)                                  gCGGTGCGGACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACg                                                                                                                   >  2:255515/1‑150 (MQ=255)                                         ggACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAAcc                                                                                                            >  1:731051/1‑150 (MQ=255)                                                             aagtGACGCTGGACAAGACGCCGGTCAGAACGTCGGTCACCGACGAGCCAGGTAACCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATGACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCa                                                                                        >  2:98753/4‑150 (MQ=255)                                                                         aCAAGACGCCGGTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGTGACCTTGACCAGGTCGCCttcgttgcctggggtacct                                                                                                                                  >  2:234571‑M2/1‑77 (MQ=255)                                                                         aCAAGACGCCGGTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGTGACCTTGACCAGGTCGCCttcgttgcctggggtacct                                                                                                                                  <  1:234571‑M2/96‑20 (MQ=255)                                                                            aGACGCCGGTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTc                                                                         >  2:59706/1‑150 (MQ=39)                                                                                    gTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACC                                                                                                                                                     >  1:40808‑M2/1‑66 (MQ=255)                                                                                    gTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACC                                                                                                                                                     <  2:40808‑M2/66‑1 (MQ=255)                                                                                      tggctcGTCGGTGACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGt                                                               >  2:427880/6‑150 (MQ=255)                                                                                       aGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCCCTGGCTCACGACCTGGTc                                                              >  2:514389/1‑150 (MQ=25)                                                                                        gCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCa                                                                                                    <  2:610986/111‑1 (MQ=38)                                                                                        gCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCa                                                                                                    >  1:610986/1‑111 (MQ=37)                                                                                        gCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCg                                                             >  2:259616/1‑150 (MQ=35)                                                                                           cGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGa                                                          <  2:731051/150‑1 (MQ=35)                                                                                            gTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACC                                                                                                                                                     >  2:623114‑M2/1‑58 (MQ=255)                                                                                            gTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACC                                                                                                                                                     <  1:623114‑M2/58‑1 (MQ=255)                                                                                                 tgaCCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGa                                                    <  1:427880/148‑1 (MQ=25)                                                                                                             cAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGccc                                        <  1:59706/150‑1 (MQ=38)                                                                                                                    cccAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCAc                                 <  1:391785/150‑1 (MQ=35)                                                                                                                     ccAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGATCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCAcc                                >  1:245976/1‑150 (MQ=25)                                                                                                                         gCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAg                                      <  2:705154/140‑1 (MQ=33)                                                                                                                         gCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAg                                      >  1:705154/1‑140 (MQ=32)                                                                                                                           aaCGAAGGCGACCTGGTCAAGGTCACCttcgttgcctggggtacccggctcgtcggtgaccgacgtgctgaccggggttttgtcgagt                                                                                        <  1:370473‑M2/88‑62 (MQ=255)                                                                                                                           aaCGAAGGCGACCTGGTCAAGGTCACCttcgttgcctggggtacccggctcgtcggtgaccgacgtgctgaccggggttttgtcgagt                                                                                        >  2:370473‑M2/1‑27 (MQ=255)                                                                                                                              gAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCACCATCAAGGcc                       >  2:683545/1‑150 (MQ=32)                                                                                                                                 ggCGACCTGGTCAAGGTCGCCttcgttgcctggggtacccggctcgtcggtgaccgacgtgctgaccggggttttgtc                                                                                            >  1:166015‑M2/1‑21 (MQ=255)                                                                                                                                 ggCGACCTGGTCAAGGTCGCCttcgttgcctggggtacccggctcgtcggtgaccgacgtgctgaccggggttttgtc                                                                                            <  2:166015‑M2/78‑58 (MQ=255)                                                                                                                                   cGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCACCATCAAGGCCGGCga                  <  1:259616/150‑1 (MQ=32)                                                                                                                                                gTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGACCGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGATCAACAATGCCCAg                                      >  1:646916/1‑117 (MQ=16)                                                                                                                                                gTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAg                                      <  2:646916/117‑1 (MQ=33)                                                                                                                                                gTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCg     <  1:255515/150‑1 (MQ=33)                                                                                                                                                   ctcttcgttgcctggggtacccggctcgtcggtgaccgacgtgctgaccggtgtcttgtcgagtgtcagttgctcgaacttaccgacgtccgcacctccaacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgtt  >  1:373622‑M2/3‑3 (MQ=255)                                                                                                                                                     |                                                                                                                                                    ACGACCCTGTCGTGATGTCGATCGCTACCGTTGGCGGTGCGGACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTCACCGACGAGCCAGGTACCCCAGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACCGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACTGTTCACGTCAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAATGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCGTAC  >  NC_002947/210468‑210763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.