New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	675401 =	43 (1.460)	3 (0.110)	3/224	NT	7.2%	coding (301/696 nt)	PP_0577	hypothetical protein
	?	NC_002947	675451 =	38 (1.410)					coding (251/696 nt)	PP_0577	hypothetical protein

GCCGCCCGTTACCACCGGCCCCCGCCCAGGCGGCCACCACCTTCGACGCCAGTGCTTACCCTGCGCCCGCTCGTGATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/675559‑675401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaactggccgTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGGGGCCGGTGGTAACGGGCGGCTGCTGGCCACATACGGGTTGCTGCCCTGGCAG  >  NC_002947/675451‑675591                                                                                                                                                                                                                                                                                                              GCCGCCCGTTACCACCGGCCCCCGCCCAGGCGGCCACCACCTTCGACGCCAGTGCTTACCCTGCGCCCGCACGTGATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGC                                                                                                                                                        >  2:364552/1‑150        GTTACCCCCGGCCCCCGCCCAGGCCGCCACGACCTTCGACGCCAGTGCTTACCCTGCGCCCGCTCGTGATTATGGGCACTACCGCAGCTGGAGCTGGCCCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGC                                                                                                                                                 <  1:440822/150‑1                                                                            ATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCC                                                                                                                                                <  1:687064/83‑1                                                                            ATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCC                                                                                                                                                >  2:687064/1‑83                                                                                                                 CCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGGGGCCGGTGGTAACG                                        >  1:176814/1‑150                                                                                                                        CCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACT                                                                                    <  1:594490/99‑1                                                                                                                        CCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACT                                                                                    >  2:594490/1‑99                                                                                                                                                       AACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGGGGCCGGTGGTAACGGGCGGCTGCTGGCCACATACGGGTTGCTGCCCTGGCAG  <  2:466147/150‑1                                                                                                                                                          TGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTG                                                                       >  1:728466/1‑78                                                                                                                                                          TGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTG                                                                       <  2:728466/78‑1                                                                                                                                                                                                                                                                                                              GCCGCCCGTTACCACCGGCCCCCGCCCAGGCGGCCACCACCTTCGACGCCAGTGCTTACCCTGCGCCCGCTCGTGATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/675559‑675401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaactggccgTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGGGGCCGGTGGTAACGGGCGGCTGCTGGCCACATACGGGTTGCTGCCCTGGCAG  >  NC_002947/675451‑675591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.