| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 911026 = | 43 (1.460) | 4 (0.140) | 4/238 | NT | 9.3% | coding (1531/2853 nt) | fruB | PTS fructose transporter subunit EI/HPr/IIA |
| ? | NC_002947 | 911059 = | 36 (1.260) | coding (1564/2853 nt) | fruB | PTS fructose transporter subunit EI/HPr/IIA | |||||
TCATCACCAGCACATAGGGTTGCTCGGGTTCAACCTGCGCCTGCACACCACACAACTGCGCCAGCACGCGGCGGCCAATATCGCGCAGGTCGGCG‑GCGCGCTCGGCGAGCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/911140‑911026‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcGATATTGGCCGCCGCGTGCTGGCGCAGTTGTGTGGTGTGCAGGCGCAGGTTGAACCCGAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGC > NC_002947/911059‑911204 TCATCACCAGCACATAGGGTTGCTCGGGTTCAACCTGCGCCTGCACACCACACAACTGCGCCAGCACGCGGCGGCCAATATCGCGCTGCTCGCCGAGCGCGC‑CGCCGACCTGCGCGATATT > 1:317253/1‑121TCATCACCAGCACATAGGGTTGCTCGGGTTCAACCTGCGCCTGCACACCACACAACTGCGCCAGCACGCGGCGGCCAATATCGCGCTGCTCGCCGAGCGCGC‑CGCCGACCTGCGCGATATT < 2:317253/121‑1 GCAGGTCGGCG‑GCGCGCTCGGCGAGCAGCGCGATATTGGCCGCCGCGTGCTGGCGCAGTTGTGTGGTGTGCAGGCGCAGGTTGAACCCGAGCAAC < 1:434285/95‑1 GCAGGTCGGCG‑GCGCGCTCGGCGAGCAGCGCGATATTGGCCGCCGCGTGCTGGCGCAGTTGTGTGGTGTGCAGGCGCAGGTTGAACCCGAGCAAC > 2:434285/1‑95 GCGCGATATTGGCCGCCGCGTGCTGGCGCAGTTGTGTGGTGTGCAGGCGCAGGTTGAACCCGAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGC < 2:47494/150‑1 TCATCACCAGCACATAGGGTTGCTCGGGTTCAACCTGCGCCTGCACACCACACAACTGCGCCAGCACGCGGCGGCCAATATCGCGCAGGTCGGCG‑GCGCGCTCGGCGAGCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/911140‑911026‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcGATATTGGCCGCCGCGTGCTGGCGCAGTTGTGTGGTGTGCAGGCGCAGGTTGAACCCGAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGC > NC_002947/911059‑911204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |