| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 996911 = | 35 (1.180) | 6 (0.220) | 5/226 | NT | 15.0% | coding (688/2550 nt) | PP_0860 | sulfite reductase flavoprotein subunit |
| ? | NC_002947 | 996946 = | 36 (1.330) | coding (653/2550 nt) | PP_0860 | sulfite reductase flavoprotein subunit | |||||
CGCGCCTTCAACTGGGACCTGCACGCCGTTGCCGGCACCTGGTGCCTGCTGTTCTATCTTCTGTTCGCCCTGACCGGGCTGTTCTGGTCCTATGAGTGGTACCGCGAAGGCCTGAACAAGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/997064‑996911‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcagcTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTTTCTTGGCCCAGTCGAAGGTC > NC_002947/996946‑997089 CGCGCCTTCAACTGGGACCTGCACGCCGTTGCCGGCACCTGGTGCCTGCTGTTCTATCTTCTGTTCGCCCTGACCGGGCTGTTCTGGTCCTATGAGTGGTACCGCGAAGGCCTGAACAAGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAG > 2:299160/1‑150 CGCCTTCAACTGGGACCTGCACGCCGTTGCCGGCACCTGGTGCCTGCTGTTCTATCTTCTGTTCGCCCTGACCGGGCTGTTCTGGTCCTATGAGTGGTACCGCGAAGGCCTGAACAAGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCA < 1:514915/150‑1 TGGGACCTGCACGCCGTTGCCGGCACCTGGTGCCTGCTGTTCTATCTTCTGTTCGCCCTGACCGGGCTGTTCTGGTCCTATGAGTGGTACCGCGAAGGCCTGAACAAGCCGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAG < 1:163489/150‑1 CTGAACAAGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAG > 1:437054/1‑73 CTGAACAAGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAG < 2:437054/73‑1 GCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCG < 1:660365/77‑1 GCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCG > 2:660365/1‑77 GCCGACGC‑GCCGGCTGCG‑‑GGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCC > 2:526798/1‑150 GCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTTTCTTGGCCCAGTCGAAG > 2:519578/1‑150 AGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTTTCTTGGCCCAGTCGAAGGTC < 2:114577/150‑1 CGCGCCTTCAACTGGGACCTGCACGCCGTTGCCGGCACCTGGTGCCTGCTGTTCTATCTTCTGTTCGCCCTGACCGGGCTGTTCTGGTCCTATGAGTGGTACCGCGAAGGCCTGAACAAGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/997064‑996911‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcagcTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTTTCTTGGCCCAGTCGAAGGTC > NC_002947/996946‑997089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |