| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 996911 = | 35 (1.180) | 6 (0.220) | 5/226 | NT | 15.0% | coding (688/2550 nt) | PP_0860 | sulfite reductase flavoprotein subunit |
| ? | NC_002947 | 996946 = | 36 (1.330) | coding (653/2550 nt) | PP_0860 | sulfite reductase flavoprotein subunit | |||||
GCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTTTCTTGGCCCAGTCGAAGGTC > NC_002947/996802‑997089 | gcggcgTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTc < 2:219389/150‑1 (MQ=255) ggcgTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAg < 1:564198/150‑1 (MQ=255) tgggacctgcacgccgttgccggcacctggtgcctgctgttctatcttctgttcgccctgaccgggctgttctggtcctatgagtggtaccgcgaaggcctgaacaagccgctggcccgcagccggcgcgtcggccagcagcTTGTTCAg < 1:163489‑M2/8‑1 (MQ=255) cTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTc > 1:238752/1‑150 (MQ=255) ggTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGt > 1:400626/1‑150 (MQ=255) ttGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTAc < 2:66828/150‑1 (MQ=255) ccAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGc < 1:132332/134‑1 (MQ=255) ccAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGc > 2:132332/1‑134 (MQ=255) aTGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAg < 1:484062/150‑1 (MQ=255) gCGTCGTAGTCCACCACCAGAGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGAc < 2:668970/150‑1 (MQ=255) aGTCCACCATCAGCGGCGGCGCATTCCTGTCGACAGTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACa < 1:4338/150‑1 (MQ=255) caccaccaGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGccc > 1:114577/1‑150 (MQ=255) caccaccaGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGccc > 1:501589/1‑150 (MQ=255) accaGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTc > 2:315604/1‑150 (MQ=255) caGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAg > 2:91604/1‑150 (MQ=255) caGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAg < 1:532055/150‑1 (MQ=255) gcgcATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACa < 2:501589/150‑1 (MQ=255) gTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGaa < 1:171044/150‑1 (MQ=255) gACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAg < 1:1534/87‑1 (MQ=255) gACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAg > 2:1534/1‑87 (MQ=255) gTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGCACAGAAGATAGAAcagcag > 1:29837/1‑150 (MQ=255) gtggggccggggccggGGACGGCGTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTGAGGGCGAACAGAAGATAGAGCAGCAGGCa < 2:29837/146‑1 (MQ=255) cTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCa < 1:286268/150‑1 (MQ=255) ctatgagtggtaccgcgaaggcctgaacaaGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAg > 1:437054‑M1/31‑73 (MQ=255) ctatgagtggtaccgcgaaggcctgaacaaGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAg < 2:437054‑M1/43‑1 (MQ=255) cGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGCACAGACGATAGAACAGAAGACACCatatca > 2:171100/1‑145 (MQ=255) cACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACgg > 2:453749/1‑150 (MQ=255) ggCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGt < 1:548691/150‑1 (MQ=255) cccGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCAc < 1:679644/122‑1 (MQ=255) cccGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCAc > 2:679644/1‑122 (MQ=255) ctgaacaaGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCGGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCa < 1:163489‑M1/142‑1 (MQ=255) ccGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGt > 2:23274/1‑62 (MQ=255) ccGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGt < 1:23274/62‑1 (MQ=255) ccGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCa > 1:299160/1‑150 (MQ=255) ctgaacaagctgctggccgacgcgccggctgcgggccagcagcTTGTTCAGGCCTTCGCGGTACCACTCATAg > 1:437054‑M2/44‑73 (MQ=255) ctgaacaagctgctggccgacgcgccggctgcgggccagcagcTTGTTCAGGCCTTCGCGGTACCACTCATAg < 2:437054‑M2/30‑1 (MQ=255) ttGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGaa < 2:238752/150‑1 (MQ=255) tgctgcTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAg < 1:91604/150‑1 (MQ=255) TGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGgcg < 1:514915‑M1/150‑1 (MQ=255) CTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGcgcg > 2:299160‑M1/1‑150 (MQ=255) gctggccgacgcgccggctgcgggccagcagcTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCg < 1:660365‑M2/45‑1 (MQ=255) gctggccgacgcgccggctgcgggccagcagcTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCg > 2:660365‑M2/33‑77 (MQ=255) gccgacgcgccggctgcgggccagcagcTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGcc > 2:526798‑M2/29‑150 (MQ=255) gCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTTTCTTg < 1:315604/150‑1 (MQ=255) gCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTTTCTTg < 2:514915/150‑1 (MQ=255) ccGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGaa > 1:356258/1‑133 (MQ=255) ccGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGaa < 2:356258/133‑1 (MQ=255) gccagcagcTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTTTCTTGGCCCAGTCGAAg > 2:519578‑M2/10‑150 (MQ=255) agcagcTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTTTCTTGGCCCAGTCGAAGGTc < 2:114577‑M2/144‑1 (MQ=255) | GCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTTTCTTGGCCCAGTCGAAGGTC > NC_002947/996802‑997089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |