New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1657084 | 19 (0.640) | 4 (0.140) | 4/230 | NT | 15.8% | coding (1452/1698 nt) | PP_1450 | TPS family activation/secretion protein |
? | NC_002947 | = 1657107 | 25 (0.910) | coding (1429/1698 nt) | PP_1450 | TPS family activation/secretion protein |
CAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGACGGTTTGCCTTCGGCGGTGCGAACCCAGCCCAGGTCCAGGCCGATGTAGGGGCGTATCTCGAAAGGTGGGGCCCAGGTCCGTGGCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1656928‑1657084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgccGTCTGGCGCAATACGTTCAGCCAGGC < NC_002947/1657107‑1657082 CAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGACGGTTTGCCTTCGGCGGTGCGAACCCAGCCCAGGTCCAGGCCGATGTAGGGGCGTATCTCGAAAGGTGGGGCCTAGGTCCGTGG < 2:430210/150‑1 AGGCGCTGTGACGGTTTGCCTTCGGCGGTGCGAACCCAGCCCAGGTCCAGGCCGATGTAGGGGCGTATCTCGAAAGGTGGGGCCCAGGTCCGTGGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGC > 1:441695/1‑128 AGGCGCTGTGACGGTTTGCCTTCGGCGGTGCGAACCCAGCCCAGGTCCAGGCCGATGTAGGGGCGTATCTCGAAAGGTGGGGCCCAGGTCCGTGGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGC < 2:441695/128‑1 GTGGGGCCCAGGTCCGTGGCAGCGCCGTCTGGCGCAATACGTTCAGCCA > 1:423594/1‑49 GTGGGGCCCAGGTCCGTGGCAGCGCCGTCTGGCGCAATACGTTCAGCCA < 2:423594/49‑1 CAGGCGCAGGCGGCTGCCGGGCAGGCTCAGTTCCAACCCTGCGGCGGCCCCGGCCAGGCGCTGTGACGGTTTGCCTTCGGCGGTGCGAACCCAGCCCAGGTCCAGGCCGATGTAGGGGCGTATCTCGAAAGGTGGGGCCCAGGTCCGTGGCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1656928‑1657084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgccGTCTGGCGCAATACGTTCAGCCAGGC < NC_002947/1657107‑1657082 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |