| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1875184 | 38 (1.290) | 4 (0.140) | 4/236 | NT | 10.1% | coding (401/567 nt) | PP_1680 | alpha‑ribazole‑5'‑phosphate phosphatase |
| ? | NC_002947 | = 1875198 | 35 (1.240) | coding (415/567 nt) | PP_1680 | alpha‑ribazole‑5'‑phosphate phosphatase | |||||
GGCCAAAGTGCCGCGCAGATCATGGAGCACCAGGCCGATGCACTGGGCCGTTTCTGGGCCGACCCTTACGCCTTCACACCGCCCAATGGCGAGCCGGTCGAGGCGTTTGCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1875033‑1875184‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaCGCGCTTGCCGGCATGCTGAAGGCGCAAACGCTCGACAGCCGCCAGCACCCGTTCGGCAAACGCCTCGACCGGCTCGCCATTGGGCGGTGTGAAGGCGTAAGGGTCGGCCCAGAAACGGCCCAGTGCATCGGCCTGGTGCTCCATGATC < NC_002947/1875198‑1875050 GGCCAAAGTGCCGCGCAGATCATGGAGCACCAGGCCGATGCACTGGGCCGTTTCTGGGCCGACCCTTACGCCTTCACACCGCCCAATGGCGAGCCGGTCGAGGCGTTTGCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAG > 1:523233/1‑150GGCCAAAGTGCCGCGCAGATCATGGAGCACCAGGCCGATGCACTGGGCCGTTTCTGGGCCGACCCTTACGCCTTCACACCGCCCAATGGCGAGCCGGTCGAGGCGTTTGCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAG > 2:104171/1‑150 GCCAAAGTGCCGCGCAGATCATGGAGCACCAGGCCGATGCACTGGGCCGTTTCTGGGCCGACCCTTACGCCTTCACACCGCCCAATGGCGAGCCGGTCGAGGCGTTTGCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAGC < 2:76878/150‑1 ACACCGCCCAATGGCGAGCCGGTCGAGGCGTTTGCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAGCACGCGCTTGCCGGCATGCTGAA > 1:322934/1‑98 ACACCGCCCAATGGCGAGCCGGTCGAGGCGTTTGCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAGCACGCGCTTGCCGGCATGCTGAA < 2:322934/98‑1 ACCGCCCAATGGCGAGCCGGTCGAGGCGTTTGCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAGCACGCGCTTGCCGGCATGCTGAAGGC < 1:380200/99‑1 ACCGCCCAATGGCGAGCCGGTCGAGGCGTTTGCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAGCACGCGCTTGCCGGCATGCTGAAGGC > 2:380200/1‑99 ACGCGCTTGCCGGCATGCTGAAGGCGCAAACGCTCGACAGCCGCCAGCACCCGTTCGGCAAACGCCTCGACCGGCTCGCCATTGGGCGGTGTGAAGGCGTAAGGGTCGGCCCAGAAACGGCCCAGTGCATCGGCCTGGTGCTCCATGATC > 1:449076/1‑150 GGCCAAAGTGCCGCGCAGATCATGGAGCACCAGGCCGATGCACTGGGCCGTTTCTGGGCCGACCCTTACGCCTTCACACCGCCCAATGGCGAGCCGGTCGAGGCGTTTGCCGAACGGGTGCTGGCGGCTGTCGAGCGTTTGCGCCTTCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1875033‑1875184‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaCGCGCTTGCCGGCATGCTGAAGGCGCAAACGCTCGACAGCCGCCAGCACCCGTTCGGCAAACGCCTCGACCGGCTCGCCATTGGGCGGTGTGAAGGCGTAAGGGTCGGCCCAGAAACGGCCCAGTGCATCGGCCTGGTGCTCCATGATC < NC_002947/1875198‑1875050 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |