New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3002882	14 (0.470)	5 (0.180)	4/232	NT	26.9%	coding (880/1464 nt)	PP_2626	hypothetical protein
	?	NC_002947	= 3002888	14 (0.500)					coding (886/1464 nt)	PP_2626	hypothetical protein

CCTTACGACGCTACCGGCTACCAGTTACGGCGTTTCGGTTTGTGGGCGCACATTCAGGTTGCTCCCCAAGTCAGGCAGGGCAACCGTACGGAATTGATGGCGGTGCCGCTGGATATCACGCGGTTCTATGAAGAGGCCATTGCCAGTAAGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3002729‑3002882 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggcggGGTCA‑A‑CCGCCTTACTGGCAATGGCCTCTTCATAGAACCGCGTGATATCCAGCGGCACCGCCATCAATTCCGTACGGTTGCCCTGCCTGACTTGGGGAGCAACCTGAATGTGCGCCCACAAACCGAAACGCCGTAACTGGTAGCCGGTA  <  NC_002947/3002888‑3002740                                                                                                                                                                                                                                                                                                                   CCTTACGACGCTACCGGCTACCAGTTACGGCGTTTCGGTTTGTGGGCGCACATTCAGGTTGCTCCCCAGGTCAGGCAGGGCAACCGTACGGAATTGATGGCGGTGCCGCTGGATATCACGCGGTTCTATGAAGAGGCCATTGCCAGTAAG                                                                                                                                                             >  1:685481/1‑150          GCTACCGGCTACCAGTTACGGCGTTTCGGTTTGTGGGCGCACATTCAGGTTGCTCCCCAAGTCAGGCAGGGCAACCGTACGGAATTGATGGCGGTGCCGCTGGATATCACGCGGTTCTATGAAGAGGCCATTGCCAGCAAGGCGGGGTCA                                                                                                                                                    >  1:916/1‑150                      CAGTTACTGCGTTTCGGTTTGTGGGCGCACATTCAGGTTGCTCCCCAAGTCAGGCAGGGCAACCGTACGGAATTGATGGCGGTGCCGCTGGATATCACGCGGTTCTATGAAGAGGCCATTGCCAGCAAGGCGGGGTCA‑A‑CCGCCTTACTG                                                                                                                                      <  2:916/150‑1                                                                                                                                          CATTGCCAGTAAGGC‑GGTTGACC‑CCGCCTTACTGGCAATGGCCTCTTCATAGAACCGCGTGATATCCAGCGGCACCGCCATCAATTCCGTACGGTTGCCCTGCCTGACTTG                                                         <  2:114466/111‑1                                                                                                                                          CATTGCCAGTAAGGC‑GGTTGA‑CCCCGCCTTACTGGCAATGGCCTCTTCATAGAACCGCGTGATATCCAGCGGCACCGCCATCAATTCCGTACGGTTGCCCTGCCTGACTTGG                                                        <  1:74733/112‑1                                                                                                                                          CATTGCCAGTAAGGC‑GGTTGA‑CCCCGCCTTACTGGCAATGGCCTCTTCATAGAACCGCGTGATATCCAGCGGCACCGCCATCAATTCCGTACGGTTGCCCTGCCTGACTTGG                                                        >  2:74733/1‑112                                                                                                                                          CATTGCCAGTAAGGC‑GGTTGA‑CCCCGCCTTACTGGCAATGGCCTCTTCATAGAACCGCGTGATATCCAGCGGCACCGCCATCAATTCCGTACGGTTGCCCTGCCTGACTTG                                                         >  1:114466/1‑111                                                                                                                                                          GGGTCA‑A‑CCGCCTTACTGGCAATGGCCTCTTCATAGAACCGCGTGATATCCAGCGGCACCGCCATCAATTCCGTACGGTTGCCCTGCCTGACTTGGGGAGCAACCTGAATGTGCGCCCACAAACCGAAACGCCGTAACTGGTAGCCGGTA  <  2:587507/150‑1                                                                                                                                                                                                                                                                                                                   CCTTACGACGCTACCGGCTACCAGTTACGGCGTTTCGGTTTGTGGGCGCACATTCAGGTTGCTCCCCAAGTCAGGCAGGGCAACCGTACGGAATTGATGGCGGTGCCGCTGGATATCACGCGGTTCTATGAAGAGGCCATTGCCAGTAAGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3002729‑3002882 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggcggGGTCA‑A‑CCGCCTTACTGGCAATGGCCTCTTCATAGAACCGCGTGATATCCAGCGGCACCGCCATCAATTCCGTACGGTTGCCCTGCCTGACTTGGGGAGCAACCTGAATGTGCGCCCACAAACCGAAACGCCGTAACTGGTAGCCGGTA  <  NC_002947/3002888‑3002740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.