New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3057317 =	36 (1.220)	4 (0.140)	4/234	NT	10.5%	coding (74/990 nt)	PP_2669	outer membrane protein
	?	NC_002947	3057349 =	34 (1.210)					coding (42/990 nt)	PP_2669	outer membrane protein

GGGCTATGACAAGCCCGAAGTGACGTGTAGCTACCCCTGACCCGACAACCACAACAATAAGGAATCCGCCATGCGCCGCCCCCTCTTCCACCGGGCCCTGCTTTACCCCAGCCTGCTGTCGGGCGCCCTGGCGCTGGCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3057460‑3057317 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGAAGCCC  >  NC_002947/3057349‑3057496                                                                                                                                                                                                                                                                                                      GGGCTATGACAAGCCCGAAGTGACGTGTAGCTACCCCTGACCCGACAACCACAACAATAAGGAATCCGCCATGCGCCGCCCCCTCTTCCACCGGGCCCTGCTTTACCCCAGCCTGCTGGCCAGCGCCAGGGCGCCCGACAGCAGGCTGGG                                                                                                                                                <  2:585217/150‑1                                                                                                                      GTCGGGCGCCCTGGCGCTGGCCAGCAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTG                                                                                            >  1:66449/1‑85                                                                                                                      GTCGGGCGCCCTGGCGCTGGCCAGCAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTG                                                                                            <  2:66449/85‑1                                                                                                                               CCTGGCGCTGGCCAGCAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAA                  <  1:585217/150‑1                                                                                                                                           CAGCAGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGAA      <  1:36406/150‑1                                                                                                                                               AGGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGAAGCCC  >  1:655913/1‑150                                                                                                                                                                                                                                                                                                      GGGCTATGACAAGCCCGAAGTGACGTGTAGCTACCCCTGACCCGACAACCACAACAATAAGGAATCCGCCATGCGCCGCCCCCTCTTCCACCGGGCCCTGCTTTACCCCAGCCTGCTGTCGGGCGCCCTGGCGCTGGCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3057460‑3057317 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagGCTGGGGTAAAGCAGGGCCCGGTGGAAGAGGGGGCGGCGCATGGCGGATTCCTTATTGTTGTGGTTGTCGGGTCAGGGGTAGCTACACGTCACTTCGGGCTTGTCATAGCCCAGGCTGTCCATTTCGTTGAAGGGATGCAGGAAGCCC  >  NC_002947/3057349‑3057496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.