| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3928383 = | 37 (1.250) | 5 (0.200) | 5/212 | NT | 16.7% | intergenic (+15/‑125) | peaE/PP_3464 | phenylacetaldehyde dehydrogenase/hypothetical protein |
| ? | NC_002947 | 3928464 = | 18 (0.710) | intergenic (+96/‑44) | peaE/PP_3464 | phenylacetaldehyde dehydrogenase/hypothetical protein | |||||
GTTAACAGCAGGGCCAATGTGCAGGCGAGTGTGTGCCTCATGGGGTTGCTCCATGGTTTTTATTGTTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3928548‑3928383‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaagaggccggCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCTGTACAACCACGATGGCACCACCCTCAACGCCGA > NC_002947/3928464‑3928608 GTTAACAGCAGGGCCAATGTGCAGGCGAGTGTGTGCCTCATGGGGTTGCTCCATGGTTTTTATTGTTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCCGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTA > 2:53744/1‑150 GTTGCTCCATGGTTTTTATTGTTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGC < 1:264870/119‑1 GTTGCTCCATGGTTTTTATTGTTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGC > 2:264870/1‑119 CCATGGTTTTTATTGTTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCC > 2:97113/1‑114 CCATGGTTTTTATTGTTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCC < 1:97113/114‑1 GTTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG > 2:135966/1‑102 GTTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG < 1:135966/102‑1 TTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGC < 1:713891/98‑1 TTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGC > 2:713891/1‑98 CGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATT > 1:67562/1‑150 GCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAAC > 1:386442/1‑100 GCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAAC < 2:386442/100‑1 GTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCC < 2:221951/128‑1 GTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCC > 1:221951/1‑128 CCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCTGTACAACCACGATGGCACCACCC > 2:197724/1‑150 CCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCT < 1:59883/127‑1 CCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCT > 2:59883/1‑127 GCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCTGTACAACCA > 2:154777/1‑134 GCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCTGTACAACCA < 1:154777/134‑1 GCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCTGTACAACCACGATGGCACCACCCTCAACGCCGA > 1:639076/1‑150 GTTAACAGCAGGGCCAATGTGCAGGCGAGTGTGTGCCTCATGGGGTTGCTCCATGGTTTTTATTGTTGTTTTTTTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3928548‑3928383‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaagaggccggCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCTGTACAACCACGATGGCACCACCCTCAACGCCGA > NC_002947/3928464‑3928608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |