New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4037820 =	20 (0.680)	5 (0.180)	4/236	NT	20.3%	coding (588/1017 nt)	PP_3558	amino acid ABC transporter substrate‑binding protein
	?	NC_002947	4037840 =	20 (0.710)					coding (608/1017 nt)	PP_3558	amino acid ABC transporter substrate‑binding protein

AACCGATCTCGGCGTCCATCGCGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4037848‑4037820 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgAGATCGGTTCGGCAATCCGGCGCGGCAAACCTGTGCTGTTCTACTACTGGAACCCGACCCCGCTGATGGGGCGCTACAAGCTCATCCGGCTGGAAGAACCCCCGTTCGATGCCCAGGCCTGGGCCACCCTCACCGACCCCGCCAAC  >  NC_002947/4037840‑4037985                                                                                                                                                                                 AACCGATCTCGGCGTCCATCGCGGCGCCGAGATCGGTTCGGCAATCCGGCGCGGCAAACCTGTGCTGTTCTACTACTGGAACCCGACCCCGCTGATGGGGCGCTACAAGCTCATCCGGCTGGAAGAACCCCCGTTCGATGCCCAGGCCTG                           >  1:132395/1‑150    CGATCTCGGCGTCCATCGCGGCGCCGAGATCGGTTCGGCAATCCGGCGCGGCAAACCTGTGCTGTTCTACTACTGGAACCCGACCCCGCTGATG                                                                                >  1:121792/1‑94    CGATCTCGGCGTCCATCGCGGCGCCGAGATCGGTTCGGCAATCCGGCGCGGCAAACCTGTGCTGTTCTACTACTGGAACCCGACCCCGCTGATG                                                                                <  2:121792/94‑1    CGATCTCGGCGTCCATCGCGGCGCCGAGATCGGTTCGGCAATCCGGCGCGGCAAACCTGTGCTGTTCTACTACTGGAACCCGA                                                                                           >  1:546027/1‑83    CGATCTCGGCGTCCATCGCGGCGCCGAGATCGGTTCGGCAATCCGGCGCGGCAAACCTGTGCTGTTCTACTACTGGAACCCGA                                                                                           <  2:546027/83‑1                          GCCGAGATCGGTTCGGCAATCCGGCGCGGCAAACCTGTGCTGTTCTACTACTGGAACCCGACCCCGCTGATGGGGCGCTACAAGCTCATCCGGCTGGAAGAACCCCCGTTCGATGCCCAGGCCTGGGCCACCCTCACCGACCCCGCCAAC  >  1:332959/1‑150                                                                                                                                                                                 AACCGATCTCGGCGTCCATCGCGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4037848‑4037820 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgAGATCGGTTCGGCAATCCGGCGCGGCAAACCTGTGCTGTTCTACTACTGGAACCCGACCCCGCTGATGGGGCGCTACAAGCTCATCCGGCTGGAAGAACCCCCGTTCGATGCCCAGGCCTGGGCCACCCTCACCGACCCCGCCAAC  >  NC_002947/4037840‑4037985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.