| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4450528 | 50 (1.690) | 6 (0.210) | 5/234 | NT | 12.1% | coding (88/3564 nt) | nicB | nicotinate dehydrogenase subunit B |
| ? | NC_002947 | = 4450543 | 40 (1.420) | coding (103/3564 nt) | nicB | nicotinate dehydrogenase subunit B | |||||
GAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4450432‑4450528‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctTGGCCACAGGGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGCAGGATTT < NC_002947/4450543‑4450395 GAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGAGGGCG < 1:65264/118‑1GAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGAGGGCG > 2:65264/1‑118 ACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGAGGGCGGG > 1:400842/1‑104 ACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGAGGGCGGG < 2:400842/104‑1 ACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGAGGGCGG < 1:788107/103‑1 ACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGAGGGCGG > 2:788107/1‑103 TTGGCCACAGGGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGCAGGATTT > 1:705104/1‑150 GAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4450432‑4450528‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctTGGCCACAGGGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGCAGGATTT < NC_002947/4450543‑4450395 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |