New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5116432 | 14 (0.470) | 3 (0.110) | 3/230 | NT | 16.2% | coding (532/594 nt) | PP_4501 | septation protein A |
? | NC_002947 | = 5116448 | 18 (0.650) | coding (548/594 nt) | PP_4501 | septation protein A |
CTGATGCCATCTGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5116277‑5116432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcgcGACAGGTACACGCCTTGCGCCACCAGGAAGATCACGGTCATGCCCAGGCTGCCGAACACCTTGAAGTCCACCCAGAAGTCCTGGAAGGTGAAGGCGACGAACAGGTTGGCCGCGCCGCAGAACAGGAAGAAAGCGATCCAGGCCAGAT < NC_002947/5116448‑5116301 CTGATGCCATCTGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGG > 1:60075/1‑150 TGATGCCATCTGGACGCGCCTGAATCTGACCTGGATCGCTTTGTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGT > 2:391721/1‑150 ATGCCATCTGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGG < 2:164454/150‑1 TGCGATCTGGGAGCGCCTGAATCTGGCGCGCATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAGCCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGC < 2:72432/150‑1 TCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCGACAGGTACACGCCTTGCGCCACCAGGAAGATCACG < 2:786268/150‑1 CCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCGACAGGTACACGCCTTGCGCCACCA > 1:687557/1‑114 CCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCGACAGGTACACGCCTTGCGCCACCA < 2:687557/114‑1 GCGACAGGTACACGCCTTGCGCCACCANGAAGATCACGGTNATGCCCNGGCTGCCGAACACCTTGAAGTCCACCCAGAAGTCCTGGAAGGTGAAGGCGACGAACAGGTTGGCCGCGCCGCAGAACAGGAAGAAAGCGATCCAGGCCAGAT > 1:765858/1‑150 CTGATGCCATCTGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5116277‑5116432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcgcGACAGGTACACGCCTTGCGCCACCAGGAAGATCACGGTCATGCCCAGGCTGCCGAACACCTTGAAGTCCACCCAGAAGTCCTGGAAGGTGAAGGCGACGAACAGGTTGGCCGCGCCGCAGAACAGGAAGAAAGCGATCCAGGCCAGAT < NC_002947/5116448‑5116301 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |