| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5116432 | 14 (0.470) | 3 (0.110) | 3/230 | NT | 16.2% | coding (532/594 nt) | PP_4501 | septation protein A |
| ? | NC_002947 | = 5116448 | 18 (0.650) | coding (548/594 nt) | PP_4501 | septation protein A | |||||
TCTGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTGGCCGCCCGCCCGGCGCACATCGAACGCCTGC > NC_002947/5116286‑5116580 | tCTGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAg < 1:784224/150‑1 (MQ=255) tGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCGTCCAGGACTTCGGTGTGTACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGc < 2:688656/150‑1 (MQ=255) aTCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCNGGGCATNACCGTGATCTTCNTGGTGGCGCAAGGCGTGTACCTGTCgc > 1:765858‑M2/1‑148 (MQ=255) cTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATg < 1:771743/150‑1 (MQ=255) ttcttcCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGAc < 1:726531/150‑1 (MQ=255) tcttcCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCgacaggtacacgccttgcgccaccaggaagatcacg < 2:786268‑M1/150‑37 (MQ=255) cttcCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGAccc < 2:720343/150‑1 (MQ=255) tGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTcc > 1:755689/1‑150 (MQ=255) gcCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGCGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCGCCAAACCCAAg < 1:21625/150‑1 (MQ=255) ccTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCgacaggtacacgccttgcgccacca > 1:687557‑M1/1‑89 (MQ=255) ccTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCgacaggtacacgccttgcgccacca < 2:687557‑M1/114‑26 (MQ=255) cTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTAc < 1:569961/114‑1 (MQ=255) cTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTAc > 2:569961/1‑114 (MQ=255) cTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCGTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTa > 2:543353/1‑150 (MQ=255) aCTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGc < 2:60075/150‑1 (MQ=255) gTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGc > 1:51078/1‑150 (MQ=255) aaGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCGATGATCGCCAGCGACGTCGCAAACTCCCt < 1:543353/150‑1 (MQ=255) gCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAgcgc > 1:378044/1‑150 (MQ=255) ccTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGAGATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTgg > 1:8135/1‑150 (MQ=255) cGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCgcgccaccaggaagatcacggtcatgcccaggctgccgaacaccttgaagtccacccagaagtcctggaaggtgaaggcgacgaacaggttggccgcgccgcagaacaggaaga < 2:786268‑M2/150‑115 (MQ=255) tggtggCGCAAGGCGTGTACCTGTCgcgccaccaggaagatcacggtcatgcccaggctgccgaacaccttgaagtccacccagaagtcctggaaggtgaaggcgacgaacagg < 2:687557‑M2/114‑90 (MQ=255) tggtggCGCAAGGCGTGTACCTGTCgcgccaccaggaagatcacggtcatgcccaggctgccgaacaccttgaagtccacccagaagtcctggaaggtgaaggcgacgaacagg > 1:687557‑M2/1‑25 (MQ=255) ggtggCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTGGCCGCCCGCCCGGCGCACATCGAAc < 2:755689/150‑1 (MQ=255) gcgacaggtacacgccttgcgccaccangaagatcacggtnatgcccnggctgccgaacaccttgaagtccacccagaagtcctggaaggtgaaggcgacgaacaggttggccgcgccgcagaacaggaagaaagcgatccaggccagat > 1:765858‑M1/1‑2 (MQ=255) gcAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCTCCAGCGACGTCGCAAACTCCCt > 1:49634/1‑106 (MQ=255) gcAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCt < 2:49634/106‑1 (MQ=255) gcAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTGTCCGCCCGCCGGGCGCACATCGAACGCCTgc > 2:275958/1‑150 (MQ=255) | TCTGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTGGCCGCCCGCCCGGCGCACATCGAACGCCTGC > NC_002947/5116286‑5116580 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |