New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6000471 =	41 (1.390)	4 (0.140)	4/236	NT	9.4%	coding (950/1428 nt)	PP_5256	cyclic nucleotide‑binding protein
	?	NC_002947	6000489 =	38 (1.340)					coding (968/1428 nt)	PP_5256	cyclic nucleotide‑binding protein

CGCATCGCGCTCTTCGTCACTCAGCGAGCGGAACACTCGCACCTCATCCAGCACCTCGCGCTGGCGGCTGCGCG‑‑‑‑‑‑‑  <  NC_002947/6000544‑6000471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgAGGTGCT  >  NC_002947/6000489‑6000495                                                                                   CGCATCGCGCTCTTCGTCACTCAGCGAGCGGAACACTCGCACCTCATCCAGCACCTCGCGCAGCCGCCAGCGCGAGGTGCT  >  1:351359/1‑81 CGCATCGCGCTCTTCGTCACTCAGCGAGCGGAACACTCGCACCTCATCCAGCACCTCGCGCAGCCGCCAGCGCGAGGTGCT  <  2:351359/81‑1                GTCACTCAGCGAGCGGAACACTCGCACCTCATCCAGCACCTCGCGCAGCCGCCAGCGCGAGGTGC   <  1:190820/65‑1                GTCACTCAGCGAGCGGAACACTCGCACCTCATCCAGCACCTCGCGCAGCCGCCAGCGCGAGGTGC   >  2:190820/1‑65                                                                                   CGCATCGCGCTCTTCGTCACTCAGCGAGCGGAACACTCGCACCTCATCCAGCACCTCGCGCTGGCGGCTGCGCG‑‑‑‑‑‑‑  <  NC_002947/6000544‑6000471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgAGGTGCT  >  NC_002947/6000489‑6000495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.