New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 192167	35 (1.180)	7 (0.240)	6/240	NT	16.4%	coding (1351/2157 nt)	paxB	toxin secretion ATP‑binding protein
	?	NC_002947	= 192188	37 (1.280)					coding (1330/2157 nt)	paxB	toxin secretion ATP‑binding protein

CAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCC  >  NC_002947/192021‑192315                                                                                                                                                   |                                                                                                                                                     cAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTg                                                                                                                                                   <  1:115919/150‑1 (MQ=255)                  gATAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCttgctggcccgctaccagca                                                                                                                                  >  1:482451‑M1/1‑130 (MQ=255)                   aTAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCttgctggcccgctaccagcaa                                                                                                                                 <  1:135187‑M1/150‑22 (MQ=255)                       gTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCgg                                                                                                                                         >  2:602522/1‑138 (MQ=255)                       gTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCgg                                                                                                                                         <  1:602522/138‑1 (MQ=255)                         gAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCttgctggcccgctaccagcaagccaag                                                                                                                           <  2:482451‑M1/150‑28 (MQ=255)                           aGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGa                                                                                                                         <  2:779582/150‑1 (MQ=255)                                    cgcgGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGATCACGTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCtaggacg                                                                                                                >  1:144109/1‑144 (MQ=255)                                              gACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCcagca                                                                                                                                  <  1:164166/122‑1 (MQ=255)                                              gACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCcagca                                                                                                                                  >  2:164166/1‑122 (MQ=255)                                                 gCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTTGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGc                                                                                                   >  2:558918/1‑150 (MQ=255)                                                    gcagggcagcaCCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACg                                                                                                <  2:783519/145‑1 (MQ=255)                                                      ccTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTTGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGc                                                                                              <  1:558918/150‑1 (MQ=255)                                                            gcaCCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGa                                                                                        <  1:584019/150‑1 (MQ=255)                                                            gcaCCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGa                                                                                        <  2:646460/150‑1 (MQ=255)                                                             caCCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAg                                                                                       <  1:372486/150‑1 (MQ=255)                                                                        tCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCAAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAg                                                                            <  2:326086/150‑1 (MQ=255)                                                                          aGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGcc                                                                          <  2:578778/150‑1 (MQ=255)                                                                           gCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGcca                                                                         >  1:477701/1‑150 (MQ=255)                                                                                 gTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCctgctggcccgctaccagcaagccaag                                                                                                                           >  1:392326‑M1/1‑67 (MQ=255)                                                                                 gTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCctgctggcccgctaccagcaagccaag                                                                                                                           <  2:392326‑M1/94‑28 (MQ=255)                                                                                     ttcGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTTGCCCAACGGACCGAGCGGACAGCCGCTCAGCGTGTATCAGGCCACCAGgccgcc                                                               >  1:513351/1‑150 (MQ=255)                                                                                     ttcGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGgccgcc                                                               >  1:266680/1‑150 (MQ=255)                                                                                       cGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCa                                                             <  2:477701/150‑1 (MQ=255)                                                                                                 ctctTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGtt                                                   <  2:266680/150‑1 (MQ=255)                                                                                                 ctctTGCGGTAGATCCATCATGTGGCCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGtt                                                   >  1:76246/1‑150 (MQ=255)                                                                                                   ctTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGc                                                 >  1:684855/1‑150 (MQ=255)                                                                                                      gCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCctgctggcccgctaccagcaagccaaggtgaccatggtc                                                                                                               <  2:248449‑M1/85‑40 (MQ=255)                                                                                                      gCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCctgctggcccgctaccagcaagccaaggtgaccatggtc                                                                                                               >  1:248449‑M1/1‑46 (MQ=255)                                                                                                             aTCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAg                                                      >  2:202206/1‑135 (MQ=255)                                                                                                             aTCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAg                                                      <  1:202206/135‑1 (MQ=255)                                                                                                                catcatGTGGTCGGTGGAGACTATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAg                                    <  2:501127/150‑1 (MQ=255)                                                                                                                catcatGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCga                                           >  2:166185/1‑143 (MQ=255)                                                                                                                catcatGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCga                                           <  1:166185/143‑1 (MQ=255)                                                                                                                 atcatGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAgg                                   >  2:578155/1‑150 (MQ=255)                                                                                                                  tcatGTGGTCGGTGGAGACCATGGTCACCTTGGCtt                                                                                                                                                    >  1:419904/1‑36 (MQ=255)                                                                                                                  tcatGTGGTCGGTGGAGACCATGGTCACCTTGGCtt                                                                                                                                                    <  2:419904/36‑1 (MQ=255)                                                                                                                  tcatGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGcc                                                                                             <  1:484824/91‑1 (MQ=255)                                                                                                                  tcatGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGcc                                                                                             >  2:484824/1‑91 (MQ=255)                                                                                                                             gTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACg                       >  1:393712/1‑150 (MQ=255)                                                                                                                                  gaCCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGgccaaggtgaccatggtctccaccgaccacatgatggatctaccgc                                                                                   <  2:248449‑M2/85‑47 (MQ=255)                                                                                                                                  gaCCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGgccaaggtgaccatggtctccaccgaccacatgatggatctaccgc                                                                                   >  1:248449‑M2/1‑39 (MQ=255)                                                                                                                                     cATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGccac                                                                        <  2:674972/93‑1 (MQ=255)                                                                                                                                     cATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGccac                                                                        >  1:674972/1‑93 (MQ=255)                                                                                                                                     cATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCAt               >  2:531922/1‑150 (MQ=255)                                                                                                                                          tCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCa          >  1:620857/1‑150 (MQ=255)                                                                                                                                              cTTGGCTTGCTGGTAGCGGGCCAGCAGgccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaac                                                              >  1:392326‑M2/1‑27 (MQ=255)                                                                                                                                              cTTGGCTTGCTGGTAGCGGGCCAGCAGgccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaac                                                              <  2:392326‑M2/94‑68 (MQ=255)                                                                                                                                              cTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGcc      >  1:124043/1‑150 (MQ=255)                                                                                                                                              cTTGGCTTGCTGGTAGCGGGCCAGCAAgccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaacgcccgctgagccgcaaggtgctgcagggcagcgtcgagttccgcggggtcgacttc      <  2:482451‑M2/150‑124 (MQ=255)                                                                                                                                                  gCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGcc  >  1:278513/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                     CAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCC  >  NC_002947/192021‑192315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.