New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 192167	35 (1.180)	7 (0.240)	6/240	NT	16.4%	coding (1351/2157 nt)	paxB	toxin secretion ATP‑binding protein
	?	NC_002947	= 192188	37 (1.280)					coding (1330/2157 nt)	paxB	toxin secretion ATP‑binding protein

AGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCA  >  NC_002947/192047‑192331                                                                                                                                              |                                                                                                                                                aGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGa                                                                                                                                         <  2:779582/150‑1 (MQ=255)          cgcgGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGATCACGTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCtaggacg                                                                                                                                >  1:144109/1‑144 (MQ=255)                       gCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTTGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGc                                                                                                                   >  2:558918/1‑150 (MQ=255)                          gcagggcagcaCCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACg                                                                                                                <  2:783519/145‑1 (MQ=255)                            ccTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTTGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGc                                                                                                              <  1:558918/150‑1 (MQ=255)                                  gcaCCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGa                                                                                                        <  2:646460/150‑1 (MQ=255)                                  gcaCCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGa                                                                                                        <  1:584019/150‑1 (MQ=255)                                   caCCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAg                                                                                                       <  1:372486/150‑1 (MQ=255)                                              tCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCAAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAg                                                                                            <  2:326086/150‑1 (MQ=255)                                                aGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGcc                                                                                          <  2:578778/150‑1 (MQ=255)                                                 gCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGcca                                                                                         >  1:477701/1‑150 (MQ=255)                                                           ttcGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTTGCCCAACGGACCGAGCGGACAGCCGCTCAGCGTGTATCAGGCCACCAGgccgcc                                                                               >  1:513351/1‑150 (MQ=255)                                                           ttcGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGgccgcc                                                                               >  1:266680/1‑150 (MQ=255)                                                             cGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCa                                                                             <  2:477701/150‑1 (MQ=255)                                                                       ctctTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGtt                                                                   <  2:266680/150‑1 (MQ=255)                                                                       ctctTGCGGTAGATCCATCATGTGGCCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGtt                                                                   >  1:76246/1‑150 (MQ=255)                                                                         ctTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGc                                                                 >  1:684855/1‑150 (MQ=255)                                                                                   aTCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAg                                                                      <  1:202206/135‑1 (MQ=255)                                                                                   aTCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAg                                                                      >  2:202206/1‑135 (MQ=255)                                                                                      catcatGTGGTCGGTGGAGACTATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAg                                                    <  2:501127/150‑1 (MQ=255)                                                                                      catcatGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCga                                                           <  1:166185/143‑1 (MQ=255)                                                                                      catcatGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCga                                                           >  2:166185/1‑143 (MQ=255)                                                                                       atcatGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAgg                                                   >  2:578155/1‑150 (MQ=255)                                                                                        tcatGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGcc                                                                                                             >  2:484824/1‑91 (MQ=255)                                                                                        tcatGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGcc                                                                                                             <  1:484824/91‑1 (MQ=255)                                                                                                   gTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACg                                       >  1:393712/1‑150 (MQ=255)                                                                                                        gaCCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGgccaaggtgaccatggtctccaccgaccacatgatggatctaccgc                                                                                                   <  2:248449‑M2/85‑47 (MQ=255)                                                                                                        gaCCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGgccaaggtgaccatggtctccaccgaccacatgatggatctaccgc                                                                                                   >  1:248449‑M2/1‑39 (MQ=255)                                                                                                           cATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGccac                                                                                        >  1:674972/1‑93 (MQ=255)                                                                                                           cATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGccac                                                                                        <  2:674972/93‑1 (MQ=255)                                                                                                           cATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCAt                               >  2:531922/1‑150 (MQ=255)                                                                                                                tCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCa                          >  1:620857/1‑150 (MQ=255)                                                                                                                    cTTGGCTTGCTGGTAGCGGGCCAGCAGgccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaac                                                                              <  2:392326‑M2/94‑68 (MQ=255)                                                                                                                    cTTGGCTTGCTGGTAGCGGGCCAGCAGgccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaac                                                                              >  1:392326‑M2/1‑27 (MQ=255)                                                                                                                    cTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGcc                      >  1:124043/1‑150 (MQ=255)                                                                                                                    cTTGGCTTGCTGGTAGCGGGCCAGCAAgccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaacgcccgctgagccgcaaggtgctgcagggcagcgtcgagttccgcggggtcgacttc                      <  2:482451‑M2/150‑124 (MQ=255)                                                                                                                        gCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGcc                  >  1:278513/1‑150 (MQ=255)                                                                                                                          ttGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCa                          <  2:507130/140‑1 (MQ=255)                                                                                                                          ttGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCa                          >  1:507130/1‑140 (MQ=255)                                                                                                                          ttGCTGGTAGCGGGCCAGCAAgccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaacgcccgctgagccgcaaggtgctgcagggcagcgtcgagttccgcggggtcgacttcacttat                <  1:135187‑M2/150‑130 (MQ=255)                                                                                                                           tGCTGGTAGCGGGCCAGCAAgccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaacgcccgctgagccgcaaggtgctgcagggcagcgtcgagttccgcggggtcgacttcacttatc               >  1:482451‑M2/1‑20 (MQ=255)                                                                                                                                gTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTg          <  2:393712/150‑1 (MQ=255)                                                                                                                                        ccAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGc                   <  2:50371/133‑1 (MQ=255)                                                                                                                                        ccAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGc                   >  1:50371/1‑133 (MQ=255)                                                                                                                                        ccAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATcagca  <  2:620857/150‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                AGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCA  >  NC_002947/192047‑192331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.