New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 45266236 (1.220)4 (0.140) 3/234 NT 10.4% coding (577/1281 nt) aruC acetylornithine aminotransferase
?NC_002947 = 452675 35 (1.250)coding (590/1281 nt) aruC acetylornithine aminotransferase
Rejected: Coverage evenness skew score above cutoff.

CACCGCAACGGCGCCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCATCCTGCT  >  NC_002947/452515‑452801
                                                                                                                                                   |                                                                                                                                           
cACCGCAACGGCGCCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTcgcg                                                                                                                                           <  2:763601/150‑1 (MQ=255)
 aCCGCAACGGCGCCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCgcgg                                                                                                                                          <  2:595264/150‑1 (MQ=255)
            gcCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGcc                                                                                                                               >  1:431019/1‑150 (MQ=255)
                         ttACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCAc                                                                                                                  <  2:129743/150‑1 (MQ=255)
                         ttACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCAc                                                                                                                  >  1:467586/1‑150 (MQ=255)
                             tGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAg                                                                                                                            >  2:358305/1‑136 (MQ=255)
                             tGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAg                                                                                                                            <  1:358305/136‑1 (MQ=255)
                                  gccaTGCCTGCCAGGGCCGTAGCCTCGGCGCGCTGGCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGGGGCGCTGCACGCTGAGGTGGATTCACGCACCGTgg                                                                                                         <  2:321999/150‑1 (MQ=255)
                                   ccaAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGc                                                                                                        >  1:410719/1‑150 (MQ=255)
                                              aTGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCg                                                                                             >  1:190609/1‑150 (MQ=255)
                                               tGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGa                                                                                            <  2:570604/150‑1 (MQ=255)
                                                 gCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATTCTCGAGc                                                                                          <  2:467586/150‑1 (MQ=255)
                                                        ccTGGGCGCGCTGTCCGCGTCCGACCCGTTGCGGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTCCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCAGCGTGGCAATCCTACTCGAGCCGATACa                                                                                   >  2:368494/1‑150 (MQ=255)
                                                         cTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg                                                                                  <  2:190609/150‑1 (MQ=255)
                                                          tCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAgg                                                                                 >  1:84860/1‑150 (MQ=255)
                                                            ggCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGt                                                                               <  1:666578/150‑1 (MQ=255)
                                                                 gcTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAggc                                                                          <  2:84860/150‑1 (MQ=255)
                                                                   tGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAggcgg                                                                        <  2:75881/150‑1 (MQ=255)
                                                                     tCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAggcgggc                                                                      <  1:233021/150‑1 (MQ=255)
                                                                       cgcgTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTGCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGt                                                                    >  1:99926/1‑150 (MQ=255)
                                                                            ccGACCCGTTGCCTTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTc                                                               <  2:84962/150‑1 (MQ=255)
                                                                              gACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATg                                                                                                 <  1:722593/114‑1 (MQ=255)
                                                                              gACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATg                                                                                                 >  2:722593/1‑114 (MQ=255)
                                                                                              aTCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGACGCTGCACGCCGCGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGTCGGGCGTTTTTCCCGCTACTCAGGAATAcc                                             >  2:180120/1‑150 (MQ=255)
                                                                                                   tGCGAACCTGGTCTGCCGGGTTTCAGCAATGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAg                                        >  1:345007/1‑150 (MQ=255)
                                                                                                   tGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAg                                        <  2:410719/150‑1 (MQ=255)
                                                                                                   tGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAg                                        >  2:542557/1‑150 (MQ=255)
                                                                                                      gAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGNCCTCGCNGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGc                                     >  1:557862/1‑150 (MQ=255)
                                                                                                        aCCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGt                                   <  1:360518/150‑1 (MQ=255)
                                                                                                            ggTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg                                                                                  <  2:646847/99‑1 (MQ=255)
                                                                                                            ggTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCGCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATAccg                                                                                  >  1:646847/1‑97 (MQ=255)
                                                                                                             gTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGaaa                              >  2:438445/1‑150 (MQ=255)
                                                                                                                  ccGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg                                                                                  <  2:160018/93‑1 (MQ=255)
                                                                                                                  ccGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg                                                                                  >  1:160018/1‑93 (MQ=255)
                                                                                                                  ccGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGctc                         >  2:283509/1‑150 (MQ=255)
                                                                                                                       tttCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCcg                    >  1:322762/1‑150 (MQ=255)
                                                                                                                                   gCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCAt        >  2:705327/1‑150 (MQ=255)
                                                                                                                                         cAACGACCTCGCCCCGCTGCACGCCGAGTTGGATTCACGCACCGTTGCAATCATGCTCGACCCGATACAGGGTGAGGCGGGCCTTATTCCCGCTACTCAGCAATACCTCAAGGGCGTGGAACCGCTCTGCCGCGAACTCGGCATCctgct  <  1:330977/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                           
CACCGCAACGGCGCCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCATCCTGCT  >  NC_002947/452515‑452801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.