New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 452662 | 36 (1.220) | 4 (0.140) | 3/234 | NT | 10.4% | coding (577/1281 nt) | aruC | acetylornithine aminotransferase |
? | NC_002947 | = 452675 | 35 (1.250) | coding (590/1281 nt) | aruC | acetylornithine aminotransferase | |||||
Rejected: Coverage evenness skew score above cutoff. |
GCCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCATCCTGCTGATCCTTGATGAGGTGCAGACCG > NC_002947/452527‑452824 | gcCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGcc > 1:431019/1‑150 (MQ=255) ttACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCAc < 2:129743/150‑1 (MQ=255) ttACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCAc > 1:467586/1‑150 (MQ=255) tGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAg > 2:358305/1‑136 (MQ=255) tGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAg < 1:358305/136‑1 (MQ=255) gccaTGCCTGCCAGGGCCGTAGCCTCGGCGCGCTGGCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGGGGCGCTGCACGCTGAGGTGGATTCACGCACCGTgg < 2:321999/150‑1 (MQ=255) ccaAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGc > 1:410719/1‑150 (MQ=255) aTGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCg > 1:190609/1‑150 (MQ=255) tGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGa < 2:570604/150‑1 (MQ=255) gCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATTCTCGAGc < 2:467586/150‑1 (MQ=255) ccTGGGCGCGCTGTCCGCGTCCGACCCGTTGCGGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTCCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCAGCGTGGCAATCCTACTCGAGCCGATACa > 2:368494/1‑150 (MQ=255) cTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg < 2:190609/150‑1 (MQ=255) tCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAgg > 1:84860/1‑150 (MQ=255) ggCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGt < 1:666578/150‑1 (MQ=255) gcTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAggc < 2:84860/150‑1 (MQ=255) tGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAggcgg < 2:75881/150‑1 (MQ=255) tCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAggcgggc < 1:233021/150‑1 (MQ=255) cgcgTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTGCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGt > 1:99926/1‑150 (MQ=255) ccGACCCGTTGCCTTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTc < 2:84962/150‑1 (MQ=255) gACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATg > 2:722593/1‑114 (MQ=255) gACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATg < 1:722593/114‑1 (MQ=255) aTCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGACGCTGCACGCCGCGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGTCGGGCGTTTTTCCCGCTACTCAGGAATAcc > 2:180120/1‑150 (MQ=255) tGCGAACCTGGTCTGCCGGGTTTCAGCAATGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAg > 1:345007/1‑150 (MQ=255) tGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAg < 2:410719/150‑1 (MQ=255) tGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAg > 2:542557/1‑150 (MQ=255) gAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGNCCTCGCNGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGc > 1:557862/1‑150 (MQ=255) aCCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGt < 1:360518/150‑1 (MQ=255) ggTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg < 2:646847/99‑1 (MQ=255) ggTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCGCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATAccg > 1:646847/1‑97 (MQ=255) gTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGaaa > 2:438445/1‑150 (MQ=255) ccGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg < 2:160018/93‑1 (MQ=255) ccGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg > 1:160018/1‑93 (MQ=255) ccGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGctc > 2:283509/1‑150 (MQ=255) tttCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCcg > 1:322762/1‑150 (MQ=255) gCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCAt > 2:705327/1‑150 (MQ=255) cAACGACCTCGCCCCGCTGCACGCCGAGTTGGATTCACGCACCGTTGCAATCATGCTCGACCCGATACAGGGTGAGGCGGGCCTTATTCCCGCTACTCAGCAATACCTCAAGGGCGTGGAACCGCTCTGCCGCGAACTCGGCATCctgct < 1:330977/150‑1 (MQ=255) cTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTgg < 2:458261/124‑1 (MQ=255) cTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTgg > 1:458261/1‑124 (MQ=255) ccGAGGTGGATTCACGCACCTTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCATCCTGCTGATCCTTGATGAGGTGCAGACCg < 1:438445/150‑1 (MQ=255) | GCCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCATCCTGCTGATCCTTGATGAGGTGCAGACCG > NC_002947/452527‑452824 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |