New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 45266236 (1.220)4 (0.140) 3/234 NT 10.4% coding (577/1281 nt) aruC acetylornithine aminotransferase
?NC_002947 = 452675 35 (1.250)coding (590/1281 nt) aruC acetylornithine aminotransferase
Rejected: Coverage evenness skew score above cutoff.

GCCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCATCCTGCTGATCCTTGATGAGGTGCAGACCG  >  NC_002947/452527‑452824
                                                                                                                                                    |                                                                                                                                                     
gcCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGcc                                                                                                                                                      >  1:431019/1‑150 (MQ=255)
             ttACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCAc                                                                                                                                         <  2:129743/150‑1 (MQ=255)
             ttACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCAc                                                                                                                                         >  1:467586/1‑150 (MQ=255)
                 tGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAg                                                                                                                                                   >  2:358305/1‑136 (MQ=255)
                 tGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAg                                                                                                                                                   <  1:358305/136‑1 (MQ=255)
                      gccaTGCCTGCCAGGGCCGTAGCCTCGGCGCGCTGGCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGGGGCGCTGCACGCTGAGGTGGATTCACGCACCGTgg                                                                                                                                <  2:321999/150‑1 (MQ=255)
                       ccaAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGc                                                                                                                               >  1:410719/1‑150 (MQ=255)
                                  aTGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCg                                                                                                                    >  1:190609/1‑150 (MQ=255)
                                   tGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGa                                                                                                                   <  2:570604/150‑1 (MQ=255)
                                     gCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATTCTCGAGc                                                                                                                 <  2:467586/150‑1 (MQ=255)
                                            ccTGGGCGCGCTGTCCGCGTCCGACCCGTTGCGGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTCCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCAGCGTGGCAATCCTACTCGAGCCGATACa                                                                                                          >  2:368494/1‑150 (MQ=255)
                                             cTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg                                                                                                         <  2:190609/150‑1 (MQ=255)
                                              tCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAgg                                                                                                        >  1:84860/1‑150 (MQ=255)
                                                ggCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGt                                                                                                      <  1:666578/150‑1 (MQ=255)
                                                     gcTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAggc                                                                                                 <  2:84860/150‑1 (MQ=255)
                                                       tGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAggcgg                                                                                               <  2:75881/150‑1 (MQ=255)
                                                         tCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAggcgggc                                                                                             <  1:233021/150‑1 (MQ=255)
                                                           cgcgTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTGCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGt                                                                                           >  1:99926/1‑150 (MQ=255)
                                                                ccGACCCGTTGCCTTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTc                                                                                      <  2:84962/150‑1 (MQ=255)
                                                                  gACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATg                                                                                                                        >  2:722593/1‑114 (MQ=255)
                                                                  gACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATg                                                                                                                        <  1:722593/114‑1 (MQ=255)
                                                                                  aTCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGACGCTGCACGCCGCGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGTCGGGCGTTTTTCCCGCTACTCAGGAATAcc                                                                    >  2:180120/1‑150 (MQ=255)
                                                                                       tGCGAACCTGGTCTGCCGGGTTTCAGCAATGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAg                                                               >  1:345007/1‑150 (MQ=255)
                                                                                       tGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAg                                                               <  2:410719/150‑1 (MQ=255)
                                                                                       tGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAg                                                               >  2:542557/1‑150 (MQ=255)
                                                                                          gAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGNCCTCGCNGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGc                                                            >  1:557862/1‑150 (MQ=255)
                                                                                            aCCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGt                                                          <  1:360518/150‑1 (MQ=255)
                                                                                                ggTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg                                                                                                         <  2:646847/99‑1 (MQ=255)
                                                                                                ggTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCGCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATAccg                                                                                                         >  1:646847/1‑97 (MQ=255)
                                                                                                 gTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGaaa                                                     >  2:438445/1‑150 (MQ=255)
                                                                                                      ccGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg                                                                                                         <  2:160018/93‑1 (MQ=255)
                                                                                                      ccGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAg                                                                                                         >  1:160018/1‑93 (MQ=255)
                                                                                                      ccGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGctc                                                >  2:283509/1‑150 (MQ=255)
                                                                                                           tttCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCcg                                           >  1:322762/1‑150 (MQ=255)
                                                                                                                       gCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCAt                               >  2:705327/1‑150 (MQ=255)
                                                                                                                             cAACGACCTCGCCCCGCTGCACGCCGAGTTGGATTCACGCACCGTTGCAATCATGCTCGACCCGATACAGGGTGAGGCGGGCCTTATTCCCGCTACTCAGCAATACCTCAAGGGCGTGGAACCGCTCTGCCGCGAACTCGGCATCctgct                         <  1:330977/150‑1 (MQ=255)
                                                                                                                                             cTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTgg                                   <  2:458261/124‑1 (MQ=255)
                                                                                                                                             cTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTgg                                   >  1:458261/1‑124 (MQ=255)
                                                                                                                                                    ccGAGGTGGATTCACGCACCTTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCATCCTGCTGATCCTTGATGAGGTGCAGACCg  <  1:438445/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GCCTATCACATCATTACTGCCAGCCAAGCCTGCCATGGCCGTAGCCTCGGCGCGCTGTCCGCGTCCGACCCGTTGCCGTGCAATCGCTGCGAACCTGGTCTGCCGGGTTTCAGCAAGGTGCCGTTCAATGACCTCGCGGCGCTGCACGCCGAGGTGGATTCACGCACCGTGGCAATCATGCTCGAGCCGATACAGGGTGAGGCGGGCGTTATTCCCGCTACTCAGGAATACCTCAAGGGCGTGGAAACGCTCTGCCGCGAACTGGGCATCCTGCTGATCCTTGATGAGGTGCAGACCG  >  NC_002947/452527‑452824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.