| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1273256 = | 24 (0.810) | 5 (0.190) | 4/216 | NT | 20.0% | intergenic (+41/+127) | PP_1113/PP_1114 | pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein |
| ? | NC_002947 | 1273345 = | 19 (0.730) | intergenic (+130/+38) | PP_1113/PP_1114 | pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein | |||||
CCCAGCACCCGCGGTATGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCA > NC_002947/1273112‑1273397 | cccAGCACCCGCGGTATGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACtgtg < 1:781381/150‑1 (MQ=255) tcggccaccaggagccgatacgcaacgccctgaaggacgttggccgtaacgacccgtgcccgtgcggtagcgagaagaagtacaagaagtgccacggcgcctgatcgactgacgcgataaaaatctgagagatggcccgaacACTGTggg < 2:637366‑M1/8‑1 (MQ=255) cccGCGGTATGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACtgtg > 2:796821/1‑143 (MQ=255) cccGCGGTATGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACtctg < 1:796821/143‑1 (MQ=255) caccaggagccgatacgcaacgccctgaaggacgttggccgtaacgacccgtgcccgtgcggtagcgagaagaagtacaagaagtgccacggcgcctgatcgactgacgcgataaaaatctgagagatggctcgaacACTGTGGGAGCgg < 2:660344‑M1/13‑1 (MQ=255) accaggagccgatacgcaacgccctgaaggacgttggccgtaacgacccgtgcccgtgcggtagcgagaagaagtacaagaagtgccacggcgcctgatcgactgacgcgataaaaatctgagagatggctcgaacACTGTGGGAGCggg < 2:790129‑M1/14‑1 (MQ=255) ccaggagccgatacgcaacgccctgaaggacgttggccgtaacgacccgtgcccgtgcggtagcgagaagaagtacaagaagtgccacggcgcctgatcgactgacgcgataaaaatctgagagatggctcgaacACTGTGGGAGCGGGc > 2:665130‑M1/136‑150 (MQ=255) cgGTATGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCaa < 2:304865/150‑1 (MQ=255) tGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACtgtg < 2:683510/134‑1 (MQ=255) tGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACtgtg > 1:683510/1‑134 (MQ=255) ccTGGTGACCATCGCCTATGATGCCGGCCGCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGGCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGa > 2:413409/1‑150 (MQ=255) cTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGAc < 1:186652/150‑1 (MQ=255) ggTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGAcgc < 2:611127/150‑1 (MQ=255) ccTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGAt > 2:595404/1‑146 (MQ=255) ccTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGAt < 1:595404/146‑1 (MQ=255) cTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCa > 1:329299/1‑130 (MQ=255) cTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCa < 2:329299/130‑1 (MQ=255) agcgagaagaagtacaagaagtgccacggcgcctgatcgactgacgcgataaaaatctgagagatggctcgaacACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGcgggcgtgc > 1:795472‑M1/75‑147 (MQ=255) aagaagtacaagaagtgccacggcgcctgatcgactgacgcgataaaaatctgagagatggctcgaacACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTc > 2:21436‑M1/69‑150 (MQ=255) gaagtacaagaagtgccacggcgcctgatcgactgacgcgataaaaatctgagagatggctcgaacACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTccc > 1:790129‑M1/67‑150 (MQ=255) cGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGtt < 2:511264/150‑1 (MQ=255) gAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAg > 2:504/1‑150 (MQ=255) gCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTgg < 2:648260/48‑1 (MQ=255) gCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTgg > 1:648260/1‑48 (MQ=255) tgtCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTAGAGCCATCTCTCAGATTTTTATcg > 2:97276/1‑150 (MQ=255) acgcgataaaaatctgagagatggctcgaacACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCcaca > 2:349717‑M1/32‑118 (MQ=255) acgcgataaaaatctgagagatggctcgaacACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCcaca < 1:349717‑M1/87‑1 (MQ=255) aGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTc > 1:660344/1‑150 (MQ=255) gATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATc > 1:663698/1‑150 (MQ=255) gATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATc > 1:560572/1‑150 (MQ=255) gCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCAt > 2:260845/1‑108 (MQ=255) gCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCAt < 1:260845/108‑1 (MQ=255) gCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGcc > 1:252677/1‑149 (MQ=255) | CCCAGCACCCGCGGTATGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCA > NC_002947/1273112‑1273397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |