| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1399029 = | 31 (1.050) | 4 (0.140) | 4/240 | NT | 13.1% | coding (856/1302 nt) | tolB | Tol biopolymer transport system protein |
| ? | NC_002947 | 1399052 = | 23 (0.800) | coding (879/1302 nt) | tolB | Tol biopolymer transport system protein | |||||
GAGCAGGTGACCAACTTCGAAGGCCTGAACGGTGCGCCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAGTCGGTCAGTGGTGGTGGTGCCGAGCGCGTAACGTTCGTAGGTA > NC_002947/1398882‑1399167 | tccgccgaaagtttcgggttggcgttgtagttacctacgaacgttacgcgctcggcaccaccaccactgaccgactgtttatagatctgcggtttgccgccacggtcggaagtgaagtagagggtgttgccatctttaccccagaacGGc < 1:259115‑M1/3‑1 (MQ=255) aGGTGACCAACTTCGAAGGCCTGAACGGTGCGCCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCgg < 2:9418/150‑1 (MQ=255) aCCAACTTCGAAGGCCTGAACGGTGCGCCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATc > 2:158442/1‑150 (MQ=255) aCCAACTTCGAAGGCCTGAACGGTGCGCCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATc > 1:400676/1‑150 (MQ=255) cAACTTCGAAGGCCTGAACGGTGCGCCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCaa > 1:470023/1‑150 (MQ=255) ggCCTGAACGGTGCGCCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCg > 1:11978/1‑150 (MQ=255) ccgatctcGGTGCGCCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTCTGGACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGt < 1:250675/143‑1 (MQ=255) cTGAACGGTGCGCCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCCATACCGAGCCGTTc > 2:259115/1‑150 (MQ=255) cGGTGCGCCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACTGGATGAACGTGGCCTAGCGCCAGGTCAGCGTTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTgggg > 1:179097/1‑150 (MQ=255) ggTGCGCCAGCCTGGTTGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGAGGGCAACCCGGACATCTACGTGATGAACGTGGTCTCGCGACAGATCAGTCGTGTTATTGCAGGCCCGGGTATTAATACCGAGCCGttagatcgg > 2:250675/1‑143 (MQ=255) gcgcCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTATGTGTTGAACGTGGCCTCGCGCCAGGTCCGAACTGCTTCTGCAGGCCCGGGTATCAAGACCGGGCCGTTCTGGGGTaaa < 2:752022/150‑1 (MQ=255) cTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCaa > 2:204619/1‑150 (MQ=255) gCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCct > 2:293609/1‑150 (MQ=255) ccGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCctc < 1:293609/150‑1 (MQ=255) ccGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGAGCTAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCctc < 2:352728/150‑1 (MQ=255) gTTCGTACTGTCCAAGGACGGCAACCCGGACATCTGCGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTAt < 2:649947/90‑1 (MQ=255) gTTCGTACTGTCCAAGGACGGCAACCCGGACATCTGCGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTAt > 1:649947/1‑90 (MQ=255) gTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAAcc > 2:132360/1‑150 (MQ=255) cAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCa < 1:204619/150‑1 (MQ=255) aaGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAg < 2:179097/150‑1 (MQ=255) gatctgcggtttgccgccacggtcggaagtgaagtagagggtgttgccatctttaccccagaacGGCCCGGGTATCAATACCGAGCCGTTCTg < 1:339604‑M1/29‑1 (MQ=255) gatctgcggtttgccgccacggtcggaagtgaagtagagggtgttgccatctttaccccagaacGGCCCGGGTATCAATACCGAGCCGTTCTg > 2:339604‑M1/65‑93 (MQ=255) aaCCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATaaa < 1:158442/150‑1 (MQ=255) aCCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAAc < 1:132360/150‑1 (MQ=255) ccGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAg > 1:25636/1‑150 (MQ=255) gACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAGTCg < 2:25636/150‑1 (MQ=255) tACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAGTCGGTCAgt > 2:598087/1‑150 (MQ=255) aCGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAGTCGGTCAgtg < 2:11978/150‑1 (MQ=255) gaACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAGTCGGTCAgtggtggtgg > 1:702022/1‑150 (MQ=255) tagagggtgttgccatctttaccccagaacGGCCCGGGTATCAATACCGAGc < 2:32643‑M1/22‑1 (MQ=255) tagagggtgttgccatctttaccccagaacGGCCCGGGTATCAATACCGAGc > 1:32643‑M1/31‑52 (MQ=255) cTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCCACACCCTCTACTTCACTTCCGACAGTGGGGCTTAACCTTGAACCTATAAACAGTCGGTCAGTGGTGGTGGTGCCGAgcg > 1:776397/1‑150 (MQ=255) cTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAGTCGGTCAGTGGTGGTGGTGCCGAgcg > 2:645410/1‑150 (MQ=255) ccAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAGTCGGTCAGTGGTGGTGGTGCCGAGCGCGTAAc > 2:11947/1‑150 (MQ=255) ccGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAGTCGGTCAGTGGTGGTGGTGCCGAGCGCGTAACGTTCGTAgg < 1:645410/150‑1 (MQ=255) gtgtTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAGTCGGTCAGTGGTGGTGGTGCCGAGCGCGTAACGTTCGTAGGTa < 1:11947/150‑1 (MQ=255) | GAGCAGGTGACCAACTTCGAAGGCCTGAACGGTGCGCCAGCCTGGTCGCCGGACGGTTCGCGCCTGGCGTTCGTACTGTCCAAGGACGGCAACCCGGACATCTACGTGATGAACGTGGCCTCGCGCCAGATCAGCCGTGTTACTGCAGGCCCGGGTATCAATACCGAGCCGTTCTGGGGTAAAGATGGCAACACCCTCTACTTCACTTCCGACCGTGGCGGCAAACCGCAGATCTATAAACAGTCGGTCAGTGGTGGTGGTGCCGAGCGCGTAACGTTCGTAGGTA > NC_002947/1398882‑1399167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |