New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1559279	29 (0.980)	4 (0.140)	4/230	NT	12.3%	coding (811/1122 nt)	PP_1370	group 1 family glycosyl transferase
	?	NC_002947	= 1559297	30 (1.090)					coding (793/1122 nt)	PP_1370	group 1 family glycosyl transferase

GCCATGGCCCGGCCATCGTTGGGCGTGCACAGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCATGTTCGAGCCCACCAGTAACAGGTGGTAGGGGTCGCCAAGTTGCTGCAT  >  NC_002947/1559131‑1559426                                                                                                                                                      |                                                                                                                                                    gCCATGGCCCGGCCATCGTTGGGCGTGCACAGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCa                                                                                                                                                    <  2:286278/150‑1 (MQ=255)  ccATGGCCCGGCCATCGTTGGGCGTGCACAGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCAt                                                                                                                                                   >  2:19735/1‑150 (MQ=255)    aTGGCCCGGCCATCGTTGGGCGTGCACAGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGc                                                                                                                                                 >  1:330437/1‑150 (MQ=255)     tGGCCCGGCCATCGTTGGGCGTGCACAGGCGGCAACTCTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCa                                                                                                                                                >  1:188702/1‑150 (MQ=255)        cccGGCCATCGTTGGGCGTGCACAGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCGCCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCa                                                                                                                                             <  1:553183/150‑1 (MQ=255)         ccGGCCATCGTTGGGCGTGCACAGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCgccgacttg                                                                                                                                            >  2:429910‑M1/1‑141 (MQ=255)            gCCATCGTTGGGCGTGCACAGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCaa                                                                                                                                         <  1:595258/150‑1 (MQ=255)              cATCGTTGGGCGTGCACAGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGt                                                                                                                                       >  1:383664/1‑150 (MQ=255)                      ggCGTGCACAGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCgctg                                                                                                                               >  1:19735‑M2/1‑146 (MQ=255)                             acaGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCa                                                                                                                                                <  2:427244/126‑1 (MQ=255)                             acaGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCa                                                                                                                                                >  1:427244/1‑126 (MQ=255)                               aGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCgccgacttgctggtgcatgctggcgaccagg                                                                                                                      <  1:429910‑M1/150‑32 (MQ=255)                                  cggcCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCgg                                                                                                                   <  2:637370/150‑1 (MQ=255)                                                gTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCg                                                                                                                    >  1:277993/1‑135 (MQ=255)                                                gTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCg                                                                                                                    <  2:277993/135‑1 (MQ=255)                                                 ttGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCgccgacttgctggtgcatgctggcgaccaggaaacattcggcctggtca                                                                                                    >  1:539674‑M1/1‑101 (MQ=255)                                                 ttGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACAACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGAACAGGCCGAATGTTTCCTGGTCCCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGcc                                                                                                    >  1:246361/1‑150 (MQ=255)                                                 tggatgatTTCAGGGAACGCACGCGGAG‑GCGCGGCCCCCACGGGGGTGGCGCTGGGCATGGCTTCGAGAATGACCAGGCCGAATCTTGCCCGGTCGCCAGCATGCACCGCGAAGTCGGCGCTTGCGATCATCCTGGGCACCGCTGCAGcc                                                                                                    <  2:50417/148‑1 (MQ=255)                                                    atgatTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCAc                                                                                                                                               >  2:755992/1‑104 (MQ=255)                                                    atgatTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCAc                                                                                                                                               <  1:755992/104‑1 (MQ=255)                                                        tttCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGa                                                                                             >  2:787572/1‑150 (MQ=255)                                                        tttCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGa                                                                                             >  2:597361/1‑150 (MQ=255)                                                         ttCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCgccgacttgctggtgcatgctggcgaccaggaaacattcggcctggtcattctcgaa                                                                                            <  2:539674‑M1/150‑58 (MQ=255)                                                                      c‑cGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGNCGATCANCCGGGCCACCTCNGCAGCCGGGCAGAAGTGATCAATGACg                                                                               <  1:674616/150‑1 (MQ=255)                                                                      c‑cGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACg                                                                               >  1:597524/1‑150 (MQ=255)                                                                                    ccaccaCGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCg                                                                  >  2:286160/1‑150 (MQ=255)                                                                                    ccaccaCGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCg                                                                  >  2:348676/1‑150 (MQ=255)                                                                                    ccaccaCGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCg                                                                  >  2:395839/1‑150 (MQ=255)                                                                                      accacGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGc                                                                >  1:214423/1‑150 (MQ=255)                                                                                            ggggTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTg                                                          <  2:383664/150‑1 (MQ=255)                                                                                               gTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGcc                                                       <  1:571713/150‑1 (MQ=255)                                                                                                    gcTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCAt                                                  >  1:397612/1‑150 (MQ=255)                                                                                                           aTGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCATGTTCGAg                                           >  2:169655/1‑150 (MQ=255)                                                                                                                ttCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCgctggcgaccaggaaacattcggcctggtcattctcgaagccatggccagcgccacccccgtggtggccgtgcgcgccggtgcgttccctgaa                                      <  2:539674‑M2/150‑94 (MQ=255)                                                                                                                ttCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCATGTTCGAGCccac                                      >  1:692245/1‑150 (MQ=255)                                                                                                                     gaATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCATGTTCGAGCCCACCAGTa                                 >  1:664826/1‑150 (MQ=255)                                                                                                                        tGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCgctggcgaccaggaaacattcggcctggtcattctcgaagccatggccagcgccacccccgtggtggccgtgcgcgccggtgcgttccctgaaatcatcaa                              >  1:539674‑M2/1‑49 (MQ=255)                                                                                                                                  gAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCATGTTCGAGCCCACCAGTAACAGGTGGTAggg                    >  1:608166/1‑150 (MQ=255)                                                                                                                                  gAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCAAGCTTTCCGGCATGTTCGAGCCCACCAGTAACAGGTGGTAggg                    >  1:7190/1‑150 (MQ=255)                                                                                                                                          ccTGGTCGCCAGCATGCACCAGCAAGTCGGCgctggcgaccaggaaacattcggcctggtcattctcgaagccatggccagcgccacccccgtggtggccgtgcgcgccggtgcgttccctgaaatcatcaacgaacagtgtggccgcct            <  1:429910‑M2/150‑120 (MQ=255)                                                                                                                                          ccTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCATGTTCGAGCCCACCAGTAACAGGTGGTAGGGGTCGCCaa            <  1:395839/150‑1 (MQ=255)                                                                                                                                            tGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCATGTTCGAGCCCACCAGTAACAGGTGGTAGGGGTAGCCACGt          >  2:245903/1‑150 (MQ=255)                                                                                                                                               tCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCATGTTCGAGCCCACCAGTAACAGGTGGTAGGGGTCGCCAAGTtgc       <  2:664826/150‑1 (MQ=255)                                                                                                                                                   cAGCgccgacttgctggtgcatgctggcgaccaggaaacattcggcctggtcattctcgaagccatggccagcgccacccccgtggtggccgtgcgcgccggtgcgttccctgaaatcatcaacgaacagtgtggccgcctgtgcacgcc   >  1:19735‑M1/1‑4 (MQ=255)                                                                                                                                                    aGCATGCACCAGCAAGTCGGCGCTGGCGACCAGTCGGGCCACGTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCATGTTCGAGCCCACCAGTAACAGGTGGTAGGGGTCGCCAAGTTGCtgcat  <  2:188702/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GCCATGGCCCGGCCATCGTTGGGCGTGCACAGGCGGCCACACTGTTCGTTGATGATTTCAGGGAACGCAC‑CGGCGCGCACGGCCACCACGGGGGTGGCGCTGGCCATGGCTTCGAGAATGACCAGGCCGAATGTTTCCTGGTCGCCAGCATGCACCAGCAAGTCGGCGCTGGCGATCAGCCGGGCCACCTCTGCAGCCGGGCAGAAGTGATCAATGACGCTGACGTTGTGCGGCACGCTGGCCGGCATGTTCGAGCCCACCAGTAACAGGTGGTAGGGGTCGCCAAGTTGCTGCAT  >  NC_002947/1559131‑1559426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.