| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2048853 | 23 (0.780) | 4 (0.160) | 3/212 | NT | 13.8% | intergenic (+49/+90) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein |
| ? | NC_002947 | = 2048910 | 30 (1.180) | intergenic (+106/+33) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein | |||||
GCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATC > NC_002947/2048708‑2049000 | gcagcaGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGcc > 1:458079/1‑150 (MQ=255) cagcagGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGccc > 1:605430/1‑150 (MQ=255) ccTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGc > 1:650019/1‑150 (MQ=255) gACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGcc < 2:147265/150‑1 (MQ=255) gTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCGGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGt < 2:174150/150‑1 (MQ=255) ggctggAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTcg > 1:153238/1‑150 (MQ=255) tggAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCgg < 2:551893/150‑1 (MQ=255) tggAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAACCCTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgg < 2:470675‑M1/150‑55 (MQ=255) tggAGCGCGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTGCAGTCTCTTTCGCACTCTTTGTGGGAGCGGGCGagcccgcgaagcaggcacctcggtggttggcacgggctgcgcccgtgttcgcgg < 1:654904‑M1/150‑55 (MQ=255) tCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccg > 2:605430‑M2/1‑144 (MQ=255) gcCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggc > 2:282788‑M1/1‑81 (MQ=255) gcCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggc < 1:282788‑M1/137‑57 (MQ=255) aCCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaa < 1:144996‑M2/150‑16 (MQ=255) ccGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaagg < 2:725607‑M2/150‑18 (MQ=255) ccGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaagg > 2:522829‑M2/1‑133 (MQ=255) cgGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGAt > 2:732651/1‑150 (MQ=255) ccGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGTAGCgt > 1:714944/1‑150 (MQ=255) ggCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGAt > 2:51328/1‑150 (MQ=255) tGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATggc < 1:492902/150‑1 (MQ=255) gaaaCCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATggcgg > 2:349770/2‑150 (MQ=255) aaaCCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGGGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATggcggc > 1:698481/1‑150 (MQ=255) cGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAAc < 1:51328/150‑1 (MQ=255) aCCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTg < 2:354065/123‑1 (MQ=255) aCCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTg > 1:354065/1‑123 (MQ=255) aGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGt > 1:717979/1‑150 (MQ=255) gcgcTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTaa > 1:726681/1‑150 (MQ=255) aaTCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTg < 1:148064/150‑1 (MQ=255) aTCCTTGTGGGAGCGGGCGTGCCCCCGAACCCGGGAAGAAACCGTGCCTACCACCGCGGTGCCTGCTTCGCGGCCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGc < 1:177954/150‑1 (MQ=38) ccTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgg > 2:522829‑M1/1‑17 (MQ=255) ccTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgg < 2:725607‑M1/150‑134 (MQ=255) ccTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgt < 1:633712‑M1/63‑47 (MQ=255) ccTTGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgt > 2:633712‑M1/1‑17 (MQ=255) cTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGAt < 2:279338/111‑1 (MQ=255) cTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGAt > 1:279338/1‑111 (MQ=255) cTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCtt < 2:650019/150‑1 (MQ=255) ttGTGGGAGCGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggt < 1:144996‑M1/150‑136 (MQ=255) ttGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTg < 2:717979/150‑1 (MQ=255) ggAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTc < 2:556565/150‑1 (MQ=255) cGGGCGagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggtggctgctga > 2:605430‑M1/1‑6 (MQ=255) gCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTAAGTCAGATGGCGGCAAAACGCCGATGTAGGTAAGCGATGATTGACTTGGAATAATACATc > 2:386800/1‑150 (MQ=255) | GCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATC > NC_002947/2048708‑2049000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |