New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2048853	23 (0.780)	4 (0.160)	3/212	NT	13.8%	intergenic (+49/+90)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	= 2048910	30 (1.180)					intergenic (+106/+33)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein

TCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCG  >  NC_002947/2048767‑2049050                                                                                                                                                |                                                                                                                                              tCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccg                                                                                                                                         >  2:605430‑M2/1‑144 (MQ=255)          aCCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaa                                                                                                                                <  1:144996‑M2/150‑16 (MQ=255)            ccGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaagg                                                                                                                              <  2:725607‑M2/150‑18 (MQ=255)            ccGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaagg                                                                                                                              >  2:522829‑M2/1‑133 (MQ=255)               cgGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGAt                                                                                                                           >  2:732651/1‑150 (MQ=255)                        ccGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGTAGCgt                                                                                                                  >  1:714944/1‑150 (MQ=255)                                 ggCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGAt                                                                                                         >  2:51328/1‑150 (MQ=255)                                    tGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATggc                                                                                                      <  1:492902/150‑1 (MQ=255)                                      gaaaCCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATggcg‑g                                                                                                   >  2:349770/2‑150 (MQ=255)                                       aaaCCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGGGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATggcg‑gc                                                                                                  >  1:698481/1‑150 (MQ=255)                                           cGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAAc                                                                                              <  1:51328/150‑1 (MQ=255)                                             aCCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTg                                                                                                                        >  1:354065/1‑123 (MQ=255)                                             aCCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTg                                                                                                                        <  2:354065/123‑1 (MQ=255)                                                        aGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGt                                                                                 >  1:717979/1‑150 (MQ=255)                                                          gcgcTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTaa                                                                               >  1:726681/1‑150 (MQ=255)                                                                    aaTCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTg                                                                     <  1:148064/150‑1 (MQ=255)                                                                     aTCCTTGTGGGAGCGGGCGTGCCCCCGAACCCGGGAAGAAACCGTGCCTACCACCGCGGTGCCTGCTTCGCGGCCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGc                                                                    <  1:177954/150‑1 (MQ=38)                                                                        cTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGAt                                                                                                         >  1:279338/1‑111 (MQ=255)                                                                        cTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGAt                                                                                                         <  2:279338/111‑1 (MQ=255)                                                                        cTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCtt                                                                 <  2:650019/150‑1 (MQ=255)                                                                         ttGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTg                                                                <  2:717979/150‑1 (MQ=255)                                                                              ggAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTc                                                           <  2:556565/150‑1 (MQ=255)                                                                                     gCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTAAGTCAGATGGCG‑GCAAAACGCCGATGTAGGTAAGCGATGATTGACTTGGAATAATACATc                                                    >  2:386800/1‑150 (MQ=255)                                                                                         gCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggtggc                                                              >  2:282788‑M2/1‑56 (MQ=255)                                                                                         gCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggtggc                                                              <  1:282788‑M2/137‑82 (MQ=255)                                                                                           ccGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaagggttgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggtggctgctgacccgctcca                                               <  2:470675‑M2/150‑97 (MQ=255)                                                                                           ccGCGAACACGGGCGCAGCCCGTGCCAACCACCGAGGTGCCTGCTTCGCGGGCTcgcccgctcccacaaagagtgcgaaagagactgcaaaacaggtcggttttcagcccaccatcggcacatgccgcgggtggctgctgacgcgctcca                                               <  1:654904‑M2/150‑97 (MQ=255)                                                                                            cgcgAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCa                                             <  1:725607/150‑1 (MQ=255)                                                                                              cgAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGAGCAGGTAGAAGA‑CCATGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCAcc                                           >  2:619147/1‑150 (MQ=255)                                                                                              cgAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCAcc                                           <  2:726681/150‑1 (MQ=255)                                                                                                   acGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaagg                                                                                                                              <  1:633712‑M2/63‑18 (MQ=255)                                                                                                   acGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTcgcccgctcccacaagg                                                                                                                              >  2:633712‑M2/1‑46 (MQ=255)                                                                                                   acGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGcc                                      >  1:723350/1‑150 (MQ=255)                                                                                                      ggCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGTGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTACCTTGGACTCATACATCCAGGTCACCTTGCCGGc                                   <  1:386800/150‑1 (MQ=255)                                                                                                           aGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGcttctt                              <  1:732651/150‑1 (MQ=255)                                                                                                                    cAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCa                     >  1:86240/1‑150 (MQ=255)                                                                                                                        caccGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGa                                                              >  1:292444/1‑105 (MQ=255)                                                                                                                        caccGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGa                                                              <  2:292444/105‑1 (MQ=255)                                                                                                                         accGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCAt                <  2:153238/150‑1 (MQ=255)                                                                                                                                    tGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCAc     <  2:144996/150‑1 (MQ=255)                                                                                                                                       ttCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCg  <  1:349770/150‑1 (MQ=255)                                                                                                                                                |                                                                                                                                              TCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG‑GCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCG  >  NC_002947/2048767‑2049050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.