| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2839511 = | 17 (0.580) | 4 (0.140) | 4/236 | NT | 18.9% | coding (55/825 nt) | ecd | flavoprotein |
| ? | NC_002947 | 2839537 = | 18 (0.640) | coding (29/825 nt) | ecd | flavoprotein | |||||
GCTTGCAGGTTCGAGGAAGTCGAGGCTGACTGGGCCGCCGCGATCGCCCAGCTCAGCATCTGCTCATCCACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCATGATGGATTGTTCCAGTGCAATGACATGCACAAGCCGAGATATACGCTCATAACGACTTGTGCACGCGTGTCA > NC_002947/2839363‑2839637 | gCTTGCAGGTTCGAGGAAGTCGAGGCTGACTGGGCCGCCGCGATCGCCCAGCTCAGCATCTGCTCATCCACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCt < 1:275758/150‑1 (MQ=255) ggagtaccgagtttttctaatcgaaggcaccgacacatcacctaactgacacgcttgcacaagtcgttatgagcgtatatctcggcttgtgaatctccttccacttgaacaatccatcattagccttcaagacgaagcactcaaagcCTg < 2:20884‑M1/3‑1 (MQ=255) ttGCAGGTTCGAGGAAGTCGAGGCTGACTGGGCCGCCGCGATCGCCCAGCTCAGCATCTGCTCATCCACAGGAAGGTCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTgg < 1:770641/150‑1 (MQ=255) gAGGAAGTCGAGGCTGACTGGGCCGCCGCGATCGCCCAGCTCAGCATCTGCTCATCCACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATaa > 2:344073/1‑150 (MQ=255) ggCTGACTGGGCCGCCGCGATCGCCCAGCTCAGCATCTGCTCATCCACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCa < 1:8736/150‑1 (MQ=255) gggCCGCCGCGATCGCCCAGCTCAGCATCTGCTCATCCACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGa < 2:109356/150‑1 (MQ=255) gggCCGCCGCGATCGCCCAGCTCAGCATCTGCTCATCCACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTCGa < 1:796770/150‑1 (MQ=255) ggCCGCCGCGATCGCCCAGCTCAGCATCTGCTCATCCACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAg > 1:276302/1‑150 (MQ=255) cctaactgacacgcgtgcacaagtcgttatgagcgtatatctcggcttgtgcatgtcattgcactggaacaatccatcatgagccttcaagacgaagcactcaaagcCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTc < 1:150189‑M1/43‑1 (MQ=255) aTCGCCCAGCTCAGCATCTGCTCATCCACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCt > 1:317198/1‑150 (MQ=255) cccAGCTCAGCATCTGCTCATCCACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGaa < 2:317198/150‑1 (MQ=255) ccAGCTCAGCATCTGCTCAAACACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAg > 2:32121/1‑150 (MQ=255) cagggaCTGATCGATGCTGAAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCATGATGGATTGTTCCAGTGCAATGACATGCACAAGcc < 2:366656/145‑1 (MQ=255) cGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCATGATGGATTGTTCCAGTGCAATGACATGCACAAGCCga < 1:32121/150‑1 (MQ=255) cGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCATGATGGATTGTTCCAGTGCAATGACATGCACAAGCCga < 2:276302/150‑1 (MQ=255) aaCATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCATGATGGATTGTTCCAGTGCAATGACATGCACAAGCCGAGATATACGCTCATAACGa < 2:314254/150‑1 (MQ=255) aCATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTTAGTGCTTCGTCTTGAAGGCTCATGGTGGCTTGTTCCCGTGCAATGACATGCACAAGCCGAGATATACGCTCATAACgcc > 1:430400/1‑148 (MQ=255) aCATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCATGATGGATTGTTCCAGTGCAATGACATGCACAAGCCGAGATATACGCTCATAACGAc < 2:765775/150‑1 (MQ=255) aCATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCATGATGGATTGTTCCAGTGCAATGACATGCACAAGCCGAGATATACGCTCATAACGAc < 1:344073/150‑1 (MQ=255) atcatgagccttcaagacgaagcactcaaagcCTGGCTCGCCATAACGGGCTTGCCAGGCttt < 1:658746‑M1/31‑1 (MQ=255) atcatgagccttcaagacgaagcactcaaagcCTGGCTCGCCATAACGGGCTTGCCAGGCttt > 2:658746‑M1/33‑63 (MQ=255) gATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCATGATGGATTGTTCCAGTGCAATGACATGCACAAGCCGAGATATACGCTCATAACGACTTGTGCAcgc > 2:659198/1‑150 (MQ=255) aCGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCCTGATGGATTGTTCCAGTGCAATGACATGCACAAGCCGAGATATACGCTCATAACGACTTGTGCACGCgtgt < 1:495972/150‑1 (MQ=255) cttcaagacgaagcactcaaagcCTGGCAAGCCCGTTATGGCGAGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCATGATGGATTGTTCCAGTGCAATGACATGCACAAGCCGAGATATACGCTCATAACGACTTGTGCACGCGTGTCa < 2:150189‑M1/127‑1 (MQ=255) | GCTTGCAGGTTCGAGGAAGTCGAGGCTGACTGGGCCGCCGCGATCGCCCAGCTCAGCATCTGCTCATCCACAGGAAGATCGCTGTAGGCACGTACTGATCGATGCTGCAACATCTGCGCGATCACGGTGTCGGCAGCAGGTAAGTTAGCTGGCTCGCCATAACGGGCTTGCCAGGCTTTGAGTGCTTCGTCTTGAAGGCTCATGATGGATTGTTCCAGTGCAATGACATGCACAAGCCGAGATATACGCTCATAACGACTTGTGCACGCGTGTCA > NC_002947/2839363‑2839637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |