| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5968466 = | 21 (0.710) | 4 (0.170) | 4/202 | NT | 15.0% | coding (162/360 nt) | PP_5723 | hypothetical protein |
| ? | NC_002947 | 5968570 = | 28 (1.160) | coding (58/360 nt) | PP_5723 | hypothetical protein | |||||
AAGCGCCGAAAAACAGCGCGTTATGTGATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGT > NC_002947/5968318‑5968610 | atcgctgctgaacaggcgcgaggcctggtcgctcagggcatcgagaagggctttgggcgcgagcatggggctgtccactgaaacggagaaatggccgccagtgtagcacgcacaaacctggcgcctgagtgcacattggcctttgtgtGc > 1:545529‑M1/149‑150 (MQ=255) tcgctgctgaacaggcgcgaggcctggtcgctcagggcatcgagaagggctttgggcgcgagcatggggctgtccactgaaacggagaaatggccgccagtgtagcacgcacaaacctggcgcctgagtgcacattggcctttgtgtGCg < 2:190272‑M1/3‑1 (MQ=255) aGCGCCGAAAAACAGCGCGTTATGTGATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCg > 2:776274/1‑150 (MQ=255) cgcCGAAAAACAGCGCGTTATGTGATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGc < 2:325079/150‑1 (MQ=255) acaggcgcgaggcctggtcgctcagggcatcgagaagggctttgggcgcgagcatggggctgtccactgaaacggagaaatggccgccagtgtagcacgcacaaacctggcgcctgagtgcacattggcctttgtgtGCGGCCTTGCGTc > 2:609241‑M1/138‑150 (MQ=255) gcgcgaggcctggtcgctcagggcatcgagaagggctttgggcgcgagcatggggctgtccactgaaatggagaaatggccgccagtgtagcacgcacaaacctggcgcctgagtgcacattggcctttgtgtGCGGCCTTGCGTCGCGa < 1:459659‑M1/17‑1 (MQ=255) gTTATGTGATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTgg < 1:7145/150‑1 (MQ=255) tgtgATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGc < 2:526925/135‑1 (MQ=255) tgtgATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGc > 1:526925/1‑135 (MQ=255) gtgATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGTGCGGCCTTGCGTCGCGATTGGGCTGc > 1:798432/1‑150 (MQ=255) ttGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAgc < 2:123974/150‑1 (MQ=255) cTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGcc > 2:182765/1‑150 (MQ=255) ctttgggcgcgagcatggggctgtccactgaaccggagaaatggccgccagtgtagcacgcacaaacctggcgcctgagtgcacattggcctttgtgtGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCtt < 1:758556‑M1/52‑1 (MQ=255) gggAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTtgt < 1:463416/138‑1 (MQ=255) gggAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTtgt > 2:463416/1‑138 (MQ=255) ggAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGCTCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGa < 1:257649/150‑1 (MQ=255) cacaATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCgg < 1:39208/150‑1 (MQ=255) aaTTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGc > 1:448975/1‑150 (MQ=255) ccactgaaacggagaaatggccgccagtgtagcacgcacaaacctggcgcctgagtgcacattggcctttgtgtGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCt < 2:130189‑M1/76‑1 (MQ=255) agcGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGGGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCaaa > 2:513298/1‑149 (MQ=255) aaatggccgccagtgtagcacgcacaaacctggcgcctgagtgcacattggcctttgtgtGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATcg > 1:130189‑M1/61‑150 (MQ=255) gggCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATcgcg < 1:182765/150‑1 (MQ=255) tggccgccagtgtagcacgcacaaacctggcgcctgagtgcacattggcctttgtgtGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGa > 2:758556‑M1/58‑150 (MQ=255) aaGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGc > 2:693824/1‑150 (MQ=255) aaaaaTGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGcac > 2:371657/1‑150 (MQ=255) aCAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCaa < 1:371657/150‑1 (MQ=255) gCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGACTCGCGTCCCAACTGCGTCGGGAGGCGCCCCCCAAGATTCGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAAtgt < 1:776274/150‑1 (MQ=255) tttGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAgg > 2:593527/1‑122 (MQ=255) tttGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAgg < 1:593527/122‑1 (MQ=255) tgtgGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTgtgc < 2:448975/150‑1 (MQ=255) tgtgGGAGAGGCCTTGAGTAACGATTGGGGTACGACGCGCCTCCCAAGATTTGTGCTTTGATGCTGATATTGCCGGGGCCGCTGTTCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTgtgc < 1:513298/150‑1 (MQ=255) tgtgAGCGGCTTTTCGTCGCGATTGGTGTGCGAAGCCCCACCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGAAGCACAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTgtgcgt < 1:314816/147‑1 (MQ=255) gggAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAgg < 1:675226/117‑1 (MQ=255) gggAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAgg > 2:675226/1‑117 (MQ=255) | AAGCGCCGAAAAACAGCGCGTTATGTGATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGCCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGT > NC_002947/5968318‑5968610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |