New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	892835 =	31 (1.050)	4 (0.140)	4/244	NT	11.6%	coding (883/2088 nt)	pta	phosphate acetyltransferase
	?	NC_002947	892868 =	30 (1.020)					coding (850/2088 nt)	pta	phosphate acetyltransferase

GATTTCGCGGTTCAGCGAGTTGAGCTGGTTGGCGGTGTCGTACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCGTGTTGGCCACCGTGCGTGCACAGATGATGATCTTGCTCATGCGCCGC  >  NC_002947/892719‑893016                                                                                                                                                      |                                                                                                                                                     gATTTCGCGGTTCAGCGAGTTGAGCTGGTTGGCGGTGTCGTACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACACACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGc                                                                                                                                                      >  1:208629/1‑150 (MQ=255)   tttCGCGGTTCAGAGAGTTGAGCTGGTTGGCGGTGTCGTACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCa                                                                                                                                                    >  2:469289/1‑150 (MQ=255)     tCGCGGTTCAGCGAGTTGAGCTGGTTGGCGGTGTCGTACGAGCCGGTGCTGACCGAAAGGAGCGGCAGGCCGGCCTGCGGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAgg                                                                                                                                                  >  2:204517/1‑150 (MQ=255)               gCGAGTTGAGCTGGTTGGTGGTGTCGTACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCAt                                                                                                                                        >  1:279457/1‑150 (MQ=255)               gCGAGTTGAGCTGGTTGGCGGTGTCGTACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCAt                                                                                                                                        <  2:789376/150‑1 (MQ=255)                        gCTGGTTGGCGGTGTCGTACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCt                                                                                                                                >  1:780214/1‑149 (MQ=255)                        gCTGGTTGGCGGTGTCGTACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCt                                                                                                                                <  2:780214/149‑1 (MQ=255)                             ttGGCGGTGTCGTACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAgg                                                                                                                          >  2:146215/1‑150 (MQ=255)                                         tACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAggg                                                                                                                                                 <  2:77969/115‑1 (MQ=255)                                         tACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAggg                                                                                                                                                 >  1:77969/1‑115 (MQ=255)                                                          cGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTc                                                                                             >  1:509074/1‑150 (MQ=255)                                                          cGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTc                                                                                             <  2:509074/150‑1 (MQ=255)                                                           gaccgcgacgacatcatcctcgctgtcagcctggcagcgatcaatggcgtccccctggCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAggg                                                                                                                                                 >  2:623346‑M1/59‑97 (MQ=255)                                                           gaccgcgacgacatcatcctcgctgtcagcctggcagcgatcaatggcgtccccctggCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAggg                                                                                                                                                 <  1:623346‑M1/39‑1 (MQ=255)                                                           gAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCg                                                                                            >  2:54284/1‑150 (MQ=255)                                                                 aTCGGCAGGCCGGCCTGAAGGGCACCGCGGGACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCggg                                                                                      <  2:208629/150‑1 (MQ=255)                                                                        tcatcctcgctgtcagcctggcagcgatcaatggcgtccccctggCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCAtt                                                                                                                                       <  2:523836‑M1/49‑1 (MQ=255)                                                                        tcatcctcgctgtcagcctggcagcgatcaatggcgtccccctggCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCAtt                                                                                                                                       >  1:523836‑M1/46‑94 (MQ=255)                                                                             gccTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCt                                                                                                                        <  1:214844/104‑1 (MQ=255)                                                                             gccTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCt                                                                                                                        >  2:214844/1‑104 (MQ=255)                                                                                          cgcgGCACAGGCCAAGGATACGCACGTCAGGCTTACTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCTGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGCGGTTACCACCAGGGTGCCCGAGGTCa                                                             >  2:190505/1‑150 (MQ=255)                                                                                              gCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAg                                                         <  1:146215/150‑1 (MQ=255)                                                                                                    gCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCgggcc                                                   >  2:729232/1‑148 (MQ=255)                                                                                                     ccAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGCACTCGTGGCTGGCGCCAGGGGTTACCACCAGGGTGCGCGCGGACGCTAGCGCGAcc                                                  >  2:188547/1‑150 (MQ=255)                                                                                                     aatggcgtccccctggccggcttgctgctgaccagcgacagcaagcctgCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGgatga                                                                                                          <  2:523836‑M2/45‑1 (MQ=255)                                                                                                     aatggcgtccccctggccggcttgctgctgaccagcgacagcaagcctgCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGgatga                                                                                                          >  1:523836‑M2/50‑94 (MQ=255)                                                                                                       aaGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGa                                                                                                                >  2:369322/1‑86 (MQ=255)                                                                                                       aaGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGa                                                                                                                <  1:369322/86‑1 (MQ=255)                                                                                                       aaGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCACTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCgt                                                >  1:708563/1‑150 (MQ=255)                                                                                                          gATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCg                                                       <  1:281289/140‑1 (MQ=255)                                                                                                          gATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCg                                                       >  2:281289/1‑140 (MQ=255)                                                                                                               gCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCgt                                                >  2:156142/1‑142 (MQ=255)                                                                                                               gCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCgt                                                <  1:156142/142‑1 (MQ=255)                                                                                                               ccctggccggcttgctgctgaccagcgacagcaagcctgCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTc                                                                                             <  1:623346‑M2/58‑1 (MQ=255)                                                                                                               ccctggccggcttgctgctgaccagcgacagcaagcctgCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTc                                                                                             >  2:623346‑M2/40‑97 (MQ=255)                                                                                                                          ttGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGAGGACGCGATTGATCGTTGCGAGGCTGACAGCGAGGATGCTGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCGTGTTGGCCACCGTGCGTGca                             >  1:300187/1‑150 (MQ=255)                                                                                                                                  gCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCGTGTTGGCCACCGTGCGTGCACAgatgat                     >  1:400388/1‑150 (MQ=255)                                                                                                                                         agcagcAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCGTGTTGGCCACCGTGCGTGCACAGATGATGATCTTg              <  1:204517/150‑1 (MQ=255)                                                                                                                                          gcagcaAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCGTGTTGGCCACCGTGCGTGCACAGATGATGATCTTGc             >  2:497271/1‑150 (MQ=255)                                                                                                                                          gcagcaAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCGTGTTGGCCACCGTGCGTGCACAGATGATGATCTTGc             <  1:497271/150‑1 (MQ=255)                                                                                                                                             gcaAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCGTGTTGGCCACCGTGCGTGCACAGATGATGATCTTGCTCa          <  1:469289/150‑1 (MQ=255)                                                                                                                                                aGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCGTGTTGGCCACCGTGCGTGCACAGATGATGATCTTGCTCATgc       <  1:729232/150‑1 (MQ=255)                                                                                                                                                     gCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCGTGTTGGGCACCGTGCGTGGCAAGAGGATGATCTTGCTCATGcgccgc  >  1:599089‑M2/2‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GATTTCGCGGTTCAGCGAGTTGAGCTGGTTGGCGGTGTCGTACGAGCCGGTGCTGACCGAAAGGATCGGCAGGCCGGCCTGCAGGGCACCGCGGCACAGGCCAAGGATACGCACGTCAGGCTTGCTGTCGCTGGTCAGCAGCAAGCCGGCCAGGGGGACGCCATTGATCGCTGCCAGGCTGACAGCGAGGATGATGTCGTCGCGGTCGCCCGGGGTTACCACCAGGGTGCCCGAGGTCAGTAGCGGGACCGTGTTGGCCACCGTGCGTGCACAGATGATGATCTTGCTCATGCGCCGC  >  NC_002947/892719‑893016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.