New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1128401 =	33 (1.120)	5 (0.170)	4/246	NT	12.5%	coding (1156/2856 nt)	gcvP‑I	glycine dehydrogenase
	?	NC_002947	1128443 =	37 (1.250)					coding (1114/2856 nt)	gcvP‑I	glycine dehydrogenase

AGACAGGCCCACATGGGCGGCATCGATCTGGCGCAGGTTGATGCCCTGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCC  >  NC_002947/1128294‑1128579                                                                                                                                                      |                                                                                                                                         tctgctgcccaacatcgccagcatgttcgccgtctaccacggccctgccggtctcaagcgcattgccgagcgcacccacgccctgaccgcgatcctcgccgccggccCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAg                                                                                                                                          >  1:380768‑M1/108‑150 (MQ=255)        cccACATGGGCGGCATCGATCTGGCGCAGGTTGATGCCCTGGGCGCGTGACTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCcggcg                                                                                                                                   >  2:393440/1‑150 (MQ=255)                    gcATCGATCTGGCGCAGGTTGATGCCCTGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATcgcg                                                                                                                       <  1:347525/150‑1 (MQ=255)                    agcatgttcgccgtgtaccacggccctgccggtctcaagcgcattgccgagcccacccgcgccctgaccgcgaccctcgccgccggccTGAAGGCCCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATcgcg                                                                                                                       >  1:776997‑M1/89‑150 (MQ=255)                       tCGATCTGGCGCAGGTTGATGCCCTGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATcgcg                                                                                                                       >  2:726626/1‑147 (MQ=255)                       tCGATCTGGCGCAGGTTGATGCCCTGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATcgcg                                                                                                                       <  1:726626/147‑1 (MQ=255)                         gATCTGGCGCAGGTTGATGCCCTGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAg                                                                                                                  >  1:86011/1‑150 (MQ=255)                         gATCTGGCGCAGGTTGATGCCCTGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAg                                                                                                                  >  2:728828/1‑150 (MQ=255)                                cgcAGGTTGATGCCCTGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTgg                                                                                                           <  1:355816/150‑1 (MQ=255)                                        gATGCCCTGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTc                                                                                                   <  1:393440/150‑1 (MQ=255)                                          tGCCCTGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCgg                                                                                                 <  1:616818/150‑1 (MQ=255)                                               tGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATg                                                                                            <  1:349285/150‑1 (MQ=255)                                                 ggCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCGTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATgcg                                                                                          >  2:607711/1‑150 (MQ=255)                                                          cTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAACCCGCTGGCGCCCACCACCGGGACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGAcc                                                                                 >  1:97175/1‑150 (MQ=255)                                                           ttGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCg                                                                                >  1:452999/1‑150 (MQ=255)                                                              tCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCa                                                                             <  1:268746/150‑1 (MQ=255)                                                                          acccacgccctgaccgcgatcctcgccgccggccCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATc                                                                                                                          >  1:360876‑M1/35‑93 (MQ=255)                                                                          acccacgccctgaccgcgatcctcgccgccggccCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATc                                                                                                                          <  2:360876‑M1/59‑1 (MQ=255)                                                                               ggCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGc                                                            <  1:480124/150‑1 (MQ=255)                                                                                      ccGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATgcgc                                                                                         <  1:723673/114‑1 (MQ=255)                                                                                      ccGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATgcgc                                                                                         >  2:723673/1‑114 (MQ=255)                                                                                      ccGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACGTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATg                                                     <  1:650261/150‑1 (MQ=255)                                                                                        cgcgatcctcgccgccggcctgaaggcgctgggcgtacaagtggtgggcgccagggccttcaGGCCGGCGGCGAGGGTCGCGGTCAGGGCGCGGGTGGGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCt                                                   >  1:776997‑M2/63‑150 (MQ=255)                                                                                          tGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTgg                                                 <  2:452999/150‑1 (MQ=255)                                                                                           gatcctcgccgccggcctgaaggcgctgggcgtacaagtggtgggcgccagcgccttcgGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGt                                                                                                         >  1:360876‑M2/60‑93 (MQ=255)                                                                                           gatcctcgccgccggcctgaaggcgctgggcgtacaagtggtgggcgccagcgccttcgGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGt                                                                                                         <  2:360876‑M2/34‑1 (MQ=255)                                                                                              cagggtcagggtATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGAt                                             >  2:21253/1‑150 (MQ=255)                                                                                                    cagggtATCGAAGGCGCTGGCGCCCACCTCTTGCACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCTTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGc                                       <  2:190930/150‑1 (MQ=255)                                                                                                           ctgaaggcgctgggcgtacaagtggtgggcgccagcgccttcgGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTAGACGGCGAACATGCTGGCGATGTTGGgcagcaga                                >  1:380768‑M2/44‑149 (MQ=255)                                                                                                              aaGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTCTCcagcccaacc                             >  1:36896/1‑144 (MQ=255)                                                                                                                 gcgcTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTgg                          >  1:411736/1‑150 (MQ=255)                                                                                                                      ggCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGAGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTg                                                  <  2:579810/121‑1 (MQ=255)                                                                                                                      ggCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGAGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTg                                                  >  1:579810/1‑121 (MQ=255)                                                                                                                       gcgcCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTg                    <  2:263960/150‑1 (MQ=255)                                                                                                                         gcCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCa                  >  2:103506/1‑150 (MQ=255)                                                                                                                             accacTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCCGGGCGTGGGTGCGCTCGGCAGGGCGCTTGAGACCGGCAGGGCCGTGGTACATTACGAACATGCTGGCGATGTTGGCCAGCAGGACCTGGGGGGTGCAGagg              >  2:257433/1‑148 (MQ=255)                                                                                                                             accacTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACGTGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATg              >  2:544476/1‑150 (MQ=255)                                                                                                                             accacTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATg              >  2:203696/1‑150 (MQ=255)                                                                                                                             accacTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATg              >  1:452355/1‑150 (MQ=255)                                                                                                                                  ttGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGt                                                                      <  2:367215/89‑1 (MQ=255)                                                                                                                                  ttGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGt                                                                      >  1:367215/1‑89 (MQ=255)                                                                                                                                      ggcgccagcgccttcaGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCtggtg     <  2:776997‑M2/134‑1 (MQ=255)                                                                                                                                       cGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCtggtgg    >  2:332153/1‑150 (MQ=255)                                                                                                                                       cGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCtggtgg    >  2:331993/1‑150 (MQ=255)                                                                                                                                        ggccAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGAGCTCGGCACTGCCCTTGCGACCAGCAGGCTTGTTGTTTACGTCGAACATTCTGGCTATTTTGGCCTGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGc   <  2:290826/148‑1 (MQ=255)                                                                                                                                         cccAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGAGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGcc  >  1:566188/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                         AGACAGGCCCACATGGGCGGCATCGATCTGGCGCAGGTTGATGCCCTGGGCGCGTGCCTTGTCATGCAGGCTGGCGGTGGCAGTGCCGGTGGCCAGGGTCAGGGTATCGAAGGCGCTGGCGCCCACCACTTGTACGCCCAGCGCCTTCAGGCCGGCGGCGAGGATCGCGGTCAGGGCGTGGGTGCGCTCGGCAATGCGCTTGAGACCGGCAGGGCCGTGGTACACGGCGAACATGCTGGCGATGTTGGCCAGCAGCACCTGGGCGGTGCAGATGTTGCTGGTGGCC  >  NC_002947/1128294‑1128579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.