New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1982470 =	27 (0.910)	3 (0.110)	3/236	NT	10.5%	coding (379/1434 nt)	PP_1775	metallo‑beta‑lactamase family protein
	?	NC_002947	1982497 =	25 (0.880)					coding (406/1434 nt)	PP_1775	metallo‑beta‑lactamase family protein

CTGTGCAGCGAGCCCTCGGCCCGGCTGCTGCCGCTGGTACTGGAAGACGCCTACAAGCTGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCATGAGCAAACCAACAGCCGGTACGTGTTTTCTGGCGATCTGGGCGCTTG  >  NC_002947/1982350‑1982639                                                                                                                                                    |                                                                                                                                               cTGTGCAGCGAGCCCTCGGCCCGGCTGCTGCCGCTGGTACTGGAAGACGCCTACAAGCTGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACg                                                                                                                                              <  1:756948/150‑1 (MQ=255)    tgCAGCGAGCCCTCGGCCCGGCTGCTGCCGCTGGTACTGGAAGACGCCTACAAGCTGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACggtg                                                                                                                                           <  1:369240/150‑1 (MQ=255)    tgCAGCGAGCCCTCGGCCCGGCTGCTGCCGCTGGTACTGGAAGACGCCTACAAGCTGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACggtg                                                                                                                                           <  1:724748/150‑1 (MQ=255)         cGAGCCCTCGGCCCGGCTGCTGCCGCTGGTACTGGAAGACGCCTACAAGCTGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGa                                                                                                                                      <  2:138906/150‑1 (MQ=255)           aGCCCTCGGCCCGGCTGCTGCCGCTGGTACTGGAAGACGCCTACAAGCTGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGt                                                                                                                                    >  1:224942/1‑150 (MQ=255)            tgttggtttgctcatgctgcatatcgcactcgacataagcggaacccagcagatgccctgcacgctgcaggcgaatacgacaggcaagaccagggtactcaaccaccgtgtgccgctgcccttcgagcagtggcacACGGTGGTTGAGTa                                                                                                                                   <  2:267523‑M2/14‑1 (MQ=255)                        gctgctGCCGCTGGTACTGGAAGACGCCTACAAGCTGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGc                                                                                                                       >  2:308465/1‑150 (MQ=255)                             tgcCGCTGGTACTGGAAGACGCCTACAAGCTGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTc                                                                                                                  <  2:297311/150‑1 (MQ=255)                                                      cAAGCTGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCa                                                                                         >  1:595099/1‑150 (MQ=255)                                                           tGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATctgc                                                                                    <  2:701486/150‑1 (MQ=255)                                                             aGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATctgctg                                                                                  <  2:457302/150‑1 (MQ=255)                                                                              tGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGa                                                                 >  1:525955/1‑150 (MQ=255)                                                                              tGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGa                                                                 <  2:78316/150‑1 (MQ=255)                                                                               gcgcAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAg                                                                <  2:595099/150‑1 (MQ=255)                                                                               gcgcAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAg                                                                <  1:308465/150‑1 (MQ=255)                                                                                      tGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGc                                                                                                   >  1:681778/1‑108 (MQ=255)                                                                                      tGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGc                                                                                                   <  2:681778/108‑1 (MQ=255)                                                                                                  tcGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCtt                                                                                                                         <  1:376188/74‑1 (MQ=255)                                                                                                  tcGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCtt                                                                                                                         >  2:376188/1‑74 (MQ=255)                                                                                                  tcGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTa                                                                       >  1:756340/1‑124 (MQ=255)                                                                                                  tcGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTa                                                                       <  2:756340/124‑1 (MQ=255)                                                                                                  tcGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTGCAAGGTCGGATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCATGAGc                                             >  1:695302/1‑150 (MQ=255)                                                                                                  tcGAATTCATCCGTGACCTTATCGTGCCGCTACCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCATGAGc                                             >  2:490660/1‑150 (MQ=255)                                                                                                      aTTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCAt                                                 >  2:787434/1‑142 (MQ=255)                                                                                                      aTTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCAt                                                 <  1:787434/142‑1 (MQ=255)                                                                                                           tactcaaccaccgtGTGCCACTGCTCGAAGGGCAGCGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCATGAGCAAACCAACa                                    <  2:267523‑M1/136‑1 (MQ=255)                                                                                                                       tCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCGGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCATGAGCAAACCAACAGCCGGTACgtgt                        >  1:258125/1‑150 (MQ=255)                                                                                                                             cactgctcgaagggcagcggcacACGGTGGTTGAGTACCCTGGTCTTGCCTGTc                                                                                                                  >  2:363201‑M2/24‑54 (MQ=255)                                                                                                                             cactgctcgaagggcagcggcacACGGTGGTTGAGTACCCTGGTCTTGCCTGTc                                                                                                                  <  1:363201‑M2/31‑1 (MQ=255)                                                                                                                              gCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCATGAGCAAACCAACAGCCGGTACGTGTTTTCTgg                 <  2:695302/150‑1 (MQ=255)                                                                                                                                             gTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCATGAGCAAACCAACAGCCGGTACGTGTTTTCTGGCGATCTGGGCGCTtg  >  1:750551/1‑150 (MQ=255)                                                                                                                                                  acACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGc                                                             <  1:767627‑M2/84‑1 (MQ=255)                                                                                                                                                  acACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGc                                                             >  2:767627‑M2/3‑86 (MQ=255)                                                                                                                                                    acGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTggg                                                                                <  1:756407/65‑1 (MQ=255)                                                                                                                                                    acGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTggg                                                                                >  2:756407/1‑65 (MQ=255)                                                                                                                                                    acGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCATGAGCAAACCAACAGCCGGTACGTGTTTTCTGGc                <  2:434677/129‑1 (MQ=255)                                                                                                                                                    acGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCATGAGCAAACCAACAGCCGGTACGTGTTTTCTGGc                >  1:434677/1‑129 (MQ=255)                                                                                                                                                    |                                                                                                                                               CTGTGCAGCGAGCCCTCGGCCCGGCTGCTGCCGCTGGTACTGGAAGACGCCTACAAGCTGAGCATCAGCAGCGAGCCTGCGCAGGTGGCGCGCTATCTCGAATTCATCCGTGACCTTATCGTGCCGCTGCCCTTCGAGCAGTGGCACACGGTGGTTGAGTACCCTGGTCTTGCCTGTCGTATTCGCCTGCAGCGTGCAGGGCATCTGCTGGGTTCCGCTTATGTCGAGTGCGATATGCAGCATGAGCAAACCAACAGCCGGTACGTGTTTTCTGGCGATCTGGGCGCTTG  >  NC_002947/1982350‑1982639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.