| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3777873 = | 16 (0.540) | 4 (0.140) | 4/232 | NT | 23.5% | coding (884/2052 nt) | PP_3340 | TonB‑dependent receptor |
| ? | NC_002947 | 3777900 = | 11 (0.390) | coding (911/2052 nt) | PP_3340 | TonB‑dependent receptor | |||||
GAGGCCGGCTACCTGACCGAGGATGACGCCCGCCATCATCCGCGCATGAGCAATGACTACAACGCCACGGACAAAGGCACGCGGCGAATGAACCAGGTCAGCGTGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTGGCGACCACAGGTGGACTGGCTGCACGCCTT > NC_002947/3777752‑3778044 | gaggCCGGCTACCTGACCGAGGATGACGCCCGCCATCATCCGCGCATGAGCAATGACTACAACGCCACGGACAAAGGCACGCGGCGAATGAACCAGGTCAGCGTGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAg < 1:19193/150‑1 (MQ=255) tACCTGACCGAGGATGACGCCCGCCATCATCCGCGCATGAGCAATGACTACAACGCCACGGACAAAGGCACGCGGCGAATGAACCAGGTCAGCGTGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAGACCTACCTc < 1:332677/150‑1 (MQ=255) gAGGATGACGCCCGCCATCATCCGCGCATGAGCAATGACTACAACGCCACGGACAAAGGCACGCGGCGAATGAACCAGGTCAGCGTGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAGACCTACCTCAACACCTAt > 2:737231/1‑150 (MQ=255) gccATCATCCGCGCATGAGCAATGACTACAACGCCACGGACAAAGGCACGCGGCGAATGAACCAGGTCAGCGTGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCt > 1:85314/1‑150 (MQ=255) aCAACGCCACGGACAAAGGCACGCGGCGAATGAACCAGGTCAGCGTGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTcac > 1:452001/1‑150 (MQ=255) tgtgaactggtgcgccagtactgcgtccagcgtcggtcgtcataggtgttgaggtaggtctTGGCCGAGACCCTGTCCTGGTCGGCCAAGa > 2:129559‑M1/62‑91 (MQ=255) tgtgaactggtgcgccagtactgcgtccagcgtcggtcgtcataggtgttgaggtaggtctTGGCCGAGACCCTGTCCTGGTCGGCCAAGa < 1:129559‑M1/30‑1 (MQ=255) aaaGGCACGCGGCGAATGAACCAGGTCAGCGTGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGac > 1:208350/1‑150 (MQ=255) tCAGCGTGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTACGAGGATCAGTACGGTGCCa < 1:371035/150‑1 (MQ=255) tGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAGACATACCTCAACACCTATGAcgaccga < 2:378136/74‑1 (MQ=255) tGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAGACATACCTCAACACCTATGAcgaccga > 1:378136/1‑74 (MQ=255) tcttggccgaccaggacagggtctcggccaAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTcaca < 1:129559‑M2/61‑1 (MQ=255) tcttggccgaccaggacagggtctcggccaAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTcaca > 2:129559‑M2/31‑91 (MQ=255) tggccgaccaggacagggtctcggccaAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCa < 2:569478‑M2/40‑1 (MQ=255) tggccgaccaggacagggtctcggccaAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCa > 1:569478‑M2/28‑67 (MQ=255) CCGAGACCCTGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTCCGATTATCAGTACGTTGCCATCACCTCGCTGACCTGGCGACCACAgg > 1:737231‑M1/1‑150 (MQ=255) CGAGACCCTGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTGGCGACCACAGGt < 2:791786‑M1/150‑1 (MQ=255) GAGCCCCTGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTGGCGACCACAGGTg > 1:794025‑M1/1‑150 (MQ=255) tGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACAGCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTgg < 1:761990/131‑1 (MQ=255) tGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTgg > 2:761990/1‑131 (MQ=255) tGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTGGCGACCACAGGTGGACTGGc > 1:780272/1‑150 (MQ=255) gTCGGCCAAGACCTACCTCAACAGCTATGGCGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGTAACGCGACACCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTGGCGACCACAGGTGGACTGGCTGCACGc > 2:36767/1‑150 (MQ=255) ggccaAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTGGCGACCACAGGTGGACTGGCTGCACGCCtt < 2:452001‑M2/145‑1 (MQ=255) ccaAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTGGCGa > 1:88590‑M2/4‑122 (MQ=255) ccaAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTGGCGa < 2:88590‑M2/119‑1 (MQ=255) | GAGGCCGGCTACCTGACCGAGGATGACGCCCGCCATCATCCGCGCATGAGCAATGACTACAACGCCACGGACAAAGGCACGCGGCGAATGAACCAGGTCAGCGTGCACTTCGACACCGACCTGGCCGAGACCCTGTCCTGGTCGGCCAAGACCTACCTCAACACCTATGACGACCGACGCTGGACGCAGTACTGGCGCACCAGTTCACAGCAGGAACGCGACACCTACGAGGATCAGTACGGTGCCATCACCTCGCTGACCTGGCGACCACAGGTGGACTGGCTGCACGCCTT > NC_002947/3777752‑3778044 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |