New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5418233 =	38 (1.290)	3 (0.110)	3/234	NT	7.6%	coding (886/1368 nt)	PP_4758	MFS transporter
	?	NC_002947	5418256 =	37 (1.320)					coding (863/1368 nt)	PP_4758	MFS transporter

GCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAGGTTCCAGGCCGACGGCCTGACCGCGCCGATGGCCTCAC  >  NC_002947/5418108‑5418400                                                                                                                                                       |                                                                                                                                                 gCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGcc                                                                                                                                                 <  1:192422/150‑1 (MQ=255)       ggCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCGAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACg                                                                                                                                           <  1:220067/150‑1 (MQ=255)          aGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCtt                                                                                                                                        <  2:712939/150‑1 (MQ=255)            cGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTtga                                                                                                                                      <  1:182179/150‑1 (MQ=255)             gACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTtgat                                                                                                                                     >  1:659475/1‑150 (MQ=255)             gACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTtgat                                                                                                                                     <  2:405878/150‑1 (MQ=255)              aCCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTtgatg                                                                                                                                    >  2:244312/1‑150 (MQ=255)                cagcagGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGATGGAAAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTgatgat                                                                                                                                  >  1:485099/1‑150 (MQ=255)                           aaggaccgccagatcgtgctgttctgcctgatatccgttcgcatccagctgaccatctatgccgccaccttctggctgcccagcatcatcaagcgtatgggcgacctgcatgtcactgaggtcgCCCATACGCTTGATGATGCTGGGCAg                                                                                                                         <  2:662022‑M2/26‑1 (MQ=255)                               cACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGaa                                                                                                                   >  2:659203/1‑150 (MQ=255)                                aCCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAg                                                                                                                  >  2:68556/1‑150 (MQ=255)                                    aGGCCTCCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGACCGCGAGCAGCCCAGGGATCGAGACGAAGAAACCGCCCTGGA‑TGTACCTG‑AGGACGCCCATACGCTCGATGATGCTGGGCAGCCAGAcggcgg                                                                                                              >  2:516066/1‑150 (MQ=255)                                      gCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTggcg                                                                                                            <  1:244312/150‑1 (MQ=255)                                      gCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGAGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTggcg                                                                                                            <  2:479013/150‑1 (MQ=255)                                       ccTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTggcgg                                                                                                           >  2:357577/1‑150 (MQ=255)                                              gAACTTCCAGCGAGCGGAACGGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGAt                                                                                                    >  2:180803/1‑150 (MQ=255)                                              gAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGAt                                                                                                    >  1:299096/1‑150 (MQ=255)                                              gAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAAAAGGTGGCGGCATAGAt                                                                                                    <  2:194132/150‑1 (MQ=255)                                                  ttCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCT‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTc                                                                                                >  2:302976/1‑150 (MQ=255)                                                  ttCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTc                                                                                                <  2:713443/150‑1 (MQ=255)                                                         gagcgGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGa                                                                                         <  1:68556/150‑1 (MQ=255)                                                           gcgGAACCGGCGGTGAAGGCGTACATGGCCAGTAGCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGCTGCTGAGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATg                                                                                       <  2:364023/150‑1 (MQ=255)                                                             ttctgcatccagctgaccatctatgccgccaccttctggctgcccagcatcatcaagcgtatgggCGACCTGCA‑TGTCACTG‑AGGTCGCCCATa                                                                                                                                             <  2:774888‑M1/29‑1 (MQ=255)                                                             ttctgcatccagctgaccatctatgccgccaccttctggctgcccagcatcatcaagcgtatgggCGACCTGCA‑TGTCACTG‑AGGTCGCCCATa                                                                                                                                             >  1:774888‑M1/66‑94 (MQ=255)                                                             ggAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATAAGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCa                                                                                     >  2:185939/1‑150 (MQ=255)                                                                    gcggcgAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAg                                                                              <  1:180803/150‑1 (MQ=255)                                                                      ggcgAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGAGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑GACGCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGAt                                                                            <  1:651301/150‑1 (MQ=255)                                                                      ggagAAGGCGTACATGGCCAGGATCGAGATCAGCCAAAGAAGCGAGTTGCAGAAACTGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCTGCATAGATGGTCAGCTGGATGCAGAAGTAGAt                                                                            <  1:209460/147‑1 (MQ=255)                                                                          aaGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCT‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAgg                                                                        <  1:302976/150‑1 (MQ=255)                                                                          aaGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATAAGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAgg                                                                        <  1:185939/150‑1 (MQ=255)                                                                            ggCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCa                                                                      >  1:623546/1‑150 (MQ=255)                                                                                        cAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCAt                                                                                                                                              <  2:126634/66‑1 (MQ=255)                                                                                        cAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCAt                                                                                                                                              >  1:126634/1‑66 (MQ=255)                                                                                                   tCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTgg                                                      >  2:386032/1‑143 (MQ=255)                                                                                                   tCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTgg                                                      <  1:386032/143‑1 (MQ=255)                                                                                                    ctgcccagcatcatcaagcgtatgggCGACCT‑CAGTGACA‑TGCAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCGAACGGATATCAGGCAGAACAGCACGATCTGGCGGTCCtt                                              <  2:662022‑M1/124‑1 (MQ=255)                                                                                                                       aagaaACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAg                                        <  1:583989/137‑1 (MQ=255)                                                                                                                       aagaaACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAg                                        >  2:583989/1‑137 (MQ=255)                                                                                                                          tatgggcgacctcagtgacatgcaggtcgCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGaa                                                                                  >  1:774888‑M2/30‑94 (MQ=255)                                                                                                                          tatgggcgacctcagtgacatgcaggtcgCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGaa                                                                                  <  2:774888‑M2/65‑1 (MQ=255)                                                                                                                            cccGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAGGTTCCAGGCCGACGGCCt                      >  2:472188/2‑150 (MQ=255)                                                                                                                            aCCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCg                                                    <  1:422951/120‑1 (MQ=255)                                                                                                                            aCCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCg                                                    >  2:422951/1‑120 (MQ=255)                                                                                                                                ACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAGGTTCCAGGCCGTCGGcctggaa                  >  2:299096‑M1/1‑147 (MQ=255)                                                                                                                                    gCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAGGTTCCAGGCCGACGGCCTGACCgcgc              >  1:640633/1‑150 (MQ=255)                                                                                                                                     cA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAGGTTCCAGGCCGACGGCCTGACCGCGcc             >  2:146284/1‑150 (MQ=255)                                                                                                                                     cA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAGGTTCCAGGCCGACGGCCTGACCGCGcc             <  2:682305/150‑1 (MQ=255)                                                                                                                                             cTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAGGTTCCAGGCCGACGGCCTGACCGCGCCGATGGcc      >  1:738800/1‑150 (MQ=255)                                                                                                                                                  ggtcgCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAGGTTCCAGGCCGACGGCCTGACCGCGCCGATGGCCTCAc  <  2:640633‑M2/145‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                 GCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCA‑TGTCACTG‑AGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGTGGCGGCATAGATGGTCAGCTGGATGCAGAAGTAGATCAGGCAGAACAGCACGATCTGGCGGTCCTTGAGCAGGTTCCAGGCCGACGGCCTGACCGCGCCGATGGCCTCAC  >  NC_002947/5418108‑5418400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.