New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5570809	32 (1.080)	3 (0.110)	3/236	NT	8.4%	coding (445/1065 nt)	queG	epoxyqueuosine reductase
	?	NC_002947	= 5570823	35 (1.240)					coding (459/1065 nt)	queG	epoxyqueuosine reductase

CTACGCGCTTGGCCGGGATTACCACAAGCTGGTGCGCAAGCGCGTGCAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAGCCACCACCAGCGAGCACTGCGGGCGTTGCCAGGC  >  NC_002947/5570676‑5570963                                                                                                                                                     |                                                                                                                                             cTACGCGCTTGGCCGGGATTACCACAAGCTGGTGCGCAAGCGCGTGCAGCTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCgg                                                                                                                                            >  1:698014‑M2/1‑148 (MQ=255)  tACGCGCTTGGCCCGGATTACCACAACCTGGTTCGCAAGCGCGTGCAGTTCCTCGCCGCCCGCATCCAGGAAGCAACCGGCCCGTTCGGCTACCCCGCCTCCGTGGCCAGCGCCCCGGCCCCGGAAACAGCCCTGGCC‑CAACCGGCCgcg                                                                                                                                           >  2:62201/1‑148 (MQ=255)             ccGGGATTACCACAAGCTGGTGCGCAAGCGCGTGCAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGAt                                                                                                                                >  2:728655/1‑150 (MQ=255)                   ttACCACAAGCTGGTGCGCAAGCGCGTGCAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCTGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCC‑GGCCTGTTCGGCCAgggctttttccagtaccggg                                                                                                                          >  1:275221‑M2/1‑130 (MQ=255)                       cacaAGCTGGTGCGCAAGCGCGTGGAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGCCAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGTCTGGGTTGGATCGGCAAGAac                                                                                                                      >  2:408215/1‑150 (MQ=255)                        acaAGCTGGTGCGCAAGCGCGTGCAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAaca                                                                                                                     <  1:262176/150‑1 (MQ=255)                                 tGCGCAAGCGCGTGCAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACgctgctgc                                                                                                            <  2:282947/150‑1 (MQ=255)                                         cgcgTGCAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGc                                                                                                    >  2:642037/1‑150 (MQ=255)                                            gTGCAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GACCAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCaaa                                                                                                 <  1:62201/150‑1 (MQ=255)                                            gTGCAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCaaa                                                                                                 >  1:754458/1‑150 (MQ=255)                                              gCAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGGAGGGTAAAAAGCCCTGGCC‑GAACAGGACGGGCTGCGTCGCATCGGCAGGGACACGCTGCTGCTCCACCGCAAAGc                                                                                               >  1:376363/1‑150 (MQ=255)                                                aGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCgg                                                                                             <  1:598144/150‑1 (MQ=255)                                                      tCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACCGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCt                                                                                       >  2:153011/1‑150 (MQ=255)                                                        cccGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTAc                                                                                     <  1:98844/149‑1 (MQ=255)                                                                cATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCt                                                                             >  2:671012/1‑150 (MQ=255)                                                                             aTCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTtc                                                                >  1:395317/1‑150 (MQ=255)                                                                              tCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTtcg                                                               >  2:44881/1‑150 (MQ=255)                                                                                   ccGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGAc                                                          <  1:642037/150‑1 (MQ=255)                                                                                    cGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGAcc                                                         <  2:376363/150‑1 (MQ=255)                                                                                            tACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTg                                                 >  1:534199/1‑150 (MQ=255)                                                                                              ccGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGcc                                               <  1:587231/150‑1 (MQ=255)                                                                                               cgcgCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCg                                              <  2:754458/150‑1 (MQ=255)                                                                                               cgcgCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCg                                              >  1:629286/1‑150 (MQ=255)                                                                                                  gcCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTg                                           <  1:671012/150‑1 (MQ=255)                                                                                                   ccTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTgg                                          <  2:696088/150‑1 (MQ=255)                                                                                                     ttCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGAc                                        <  1:728655/150‑1 (MQ=255)                                                                                                        gTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGaa                                     >  1:80138/1‑150 (MQ=255)                                                                                                         tGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAg                                    >  1:80220/1‑150 (MQ=255)                                                                                                            aCAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAGcc                                  <  1:515414/149‑1 (MQ=255)                                                                                                            aCAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCCGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAGcc                                  >  2:515414/1‑149 (MQ=255)                                                                                                              aGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAGccacc                               >  2:67148/1‑150 (MQ=255)                                                                                                                     cGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCgggctttttccagtaccggggcgctgtccacgaaggcgcggtagc                                                                                                 >  2:394569‑M2/1‑32 (MQ=255)                                                                                                                     cGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCgggctttttccagtaccggggcgctgtccacgaaggcgcggtagc                                                                                                 <  1:394569‑M2/77‑46 (MQ=255)                                                                                                                      ggTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAGCCACCACCAGCGa                       <  2:518841/150‑1 (MQ=255)                                                                                                                            ggAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAGCCACCACCAGCGAGCACTg                 <  2:367289/150‑1 (MQ=255)                                                                                                                                        ggCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAGCCACCACCAGCGAGCACTGCGGGCGTTGCCa     <  2:395317/150‑1 (MQ=255)                                                                                                                                         gCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTtcgt                                                              >  2:512649/1‑92 (MQ=255)                                                                                                                                         gCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTtcgt                                                              <  1:512649/92‑1 (MQ=255)                                                                                                                                           c‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAGCCACCACCAGCGAGCACTGCGGGCGTTGCCAGgc  <  1:44881/150‑1 (MQ=255)                                                                                                                                           c‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAGCCACCACCAGCGAGCACTGCGGGCGTTGCCAGgc  >  1:424424/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                             CTACGCGCTTGGCCGGGATTACCACAAGCTGGTGCGCAAGCGCGTGCAGTTCCTCGCCGACCGCATCCAGGAAGCCATCGGCCCGTTCGGCTACCGCGCCTTCGTGGACAGCGCCCCGGTACTGGAAAAAGCCCTGGCC‑GAACAGGCCGGGCTGGGTTGGATCGGCAAGAACACGCTGCTGCTCAACCGCAAAGCGGGCAGCTACTTCTTCCTTGCCGAACTGTTCGTCGACCTGCCGTTGCCGGTGGACGAAGCCACCACCAGCGAGCACTGCGGGCGTTGCCAGGC  >  NC_002947/5570676‑5570963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.