| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1443135 | 17 (0.680) | 8 (0.400) | 8/214 | 1.3 | 32.8% | intergenic (‑66/+110) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
| ? | NC_002947 | = 1443153 | 19 (0.940) | intergenic (‑84/+92) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator | |||||
CCGAGCTTGGGGTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1442972‑1443135‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttcgcgggcaagcccgctcctacAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGGACCAGCACAGCCCCACCCCGCCTTGCAGAGAAGTTGCCCGATGAAAAAGACCGTCCTGGCCTTCAGCCGTATCACCCCGGCCATGGCC < NC_002947/1443153‑1443022 CCGAGCTTGGGGTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGCACCTTCGCGGGC > 1:570538/1‑150 GTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCC > 1:66044/1‑150 GTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCC < 2:403265/150‑1 TTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCG > 2:583367/1‑145 TTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCG < 1:583367/145‑1 GAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCG > 1:471225/1‑118 GAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCG < 2:471225/118‑1 TTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTA < 2:320877/150‑1 GTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAAATTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTT < 1:224817/150‑1 TTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAG > 2:156741/1‑100 TTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAG < 1:156741/100‑1 GCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGG < 1:624754/76‑1 GCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGG > 2:624754/1‑76 TGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGGACCAGCACAGCCCCACCCCGCCTTGCAGAGAAGTTGCCCGATGAAAAAGACCGTCCTGGCCTTCAGCCGTATCACC > 2:366539/1‑150 GGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCAGCACAGCCCCACCCCGCCTTGCAGAGAAGTTGCCCGATGAAAAAGACCGTCCTGGCCTTCAGCCGTATCACCC > 2:570538/1‑150 CTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGGACCAGCACAGCCCCACCCCGCCTTGCAGAGAAGTTGCCCGATGAAAAAGACCGTCCTGGCCTTCAGCCGTATCACCCCGGCC > 1:69643/1‑150 GCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGGACCAGCACAGCCCCACCCCGCCTTGCAGAGAAGTTGCCCGATGAAAAAGACCGTCCTGGCCTTCAGCCGTATCACCCCGGCCATGG < 2:341325/150‑1 GGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGGACCAGCACAGCCCCACCCCGCCTTGCAGAGAAGTTGCCCGATGAAAAAGACCGTCCTGGCCTTCAGCCCTCCCTCCCCGGCCATGGac < 2:8699/150‑3 CCGAGCTTGGGGTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1442972‑1443135‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttcgcgggcaagcccgctcctacAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGGACCAGCACAGCCCCACCCCGCCTTGCAGAGAAGTTGCCCGATGAAAAAGACCGTCCTGGCCTTCAGCCGTATCACCCCGGCCATGGCC < NC_002947/1443153‑1443022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |