| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1526707 | 19 (0.760) | 7 (0.300) | 7/246 | 1.8 | 27.6% | coding (852/957 nt) | ddlB | D‑alanine‑‑D‑alanine ligase B |
| ? | NC_002947 | = 1526720 | 19 (0.820) | coding (865/957 nt) | ddlB | D‑alanine‑‑D‑alanine ligase B | |||||
GTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1526557‑1526707‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccaggcTATGATCTG‑TCAT‑GCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAG < NC_002947/1526720‑1526588 GTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGG > 2:300365/1‑150 CTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTG‑TCAT‑GCCTGG < 1:431408/130‑1 CTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTG‑TCAT‑GCCTGG > 2:431408/1‑130 TGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTG‑TCAT‑GCCTGGT > 1:96453/1‑111 TGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTG‑TCAT‑GCCTGGT < 2:96453/111‑1 GGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTG‑TCAT‑GCCT < 1:521667/82‑1 GGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTG‑TCAT‑GCCT > 2:521667/1‑82 TCAACACCGCACCAGGC‑ATGA‑CAGATCATAGCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAG > 1:300365/1‑150 GTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1526557‑1526707‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccaggcTATGATCTG‑TCAT‑GCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAG < NC_002947/1526720‑1526588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |