New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3701419	16 (0.640)	5 (0.210)	4/254	2.7	21.6%	coding (116/1053 nt)	PP_3266	hypothetical protein
	?	NC_002947	= 3701458	21 (0.880)					coding (77/1053 nt)	PP_3266	hypothetical protein

TGCCAGTTCATCGTCCTGTTTCAGGCCTTTGGGGTAGAAGTCCTTGCGCCAGGGGCCATAGCGCCACCCGGAGATACCGATGCGAATATCGCTCACGCTGCCGTCCTCACTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3701304‑3701419 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgg‑‑CCTTTGCCGGTCGCACTTTCAGAGCGACCGAACAAGGAACCGGCAG  <  NC_002947/3701458‑3701413                                                                                                                                                                      TGCCAGTTCATCGTCCTGTTTCAGGCCTTTGGGGTAGAAGTCCTTGCGCCAGGGGCCATAGCGCCACCCGGAGATACCGATGCGAATATCGCTCACGCTGCCGTCCTACCTGCCGGTTCCTTGTCCGGTCGCACTTTCAGAGCGACCGAA                <  2:122166/150‑1                                           CTTGCGCCAGGGGCCATAGCGCCACCCGGAGATACCGATGCGAATATCGCTCACGCTGCCGTCCTCACTGCCGG‑‑CCTTTGCCGGTCGCACTTTCAGAGCGACCGAACAAGGAACCGGCAG  >  1:139376/1‑120                                           CTTGCGCCAGGGGCCATAGCGCCACCCGGAGATACCGATGCGAATATCGCTCACGCTGCCGTCCTCACTGCCGG‑‑CCTTTGCCGGTCGCACTTTCAGAGCGACCGAACAAGGAACCGGCAG  <  2:139376/120‑1                                           CTTGCGCCAGGGGCCATAGCGCCACCCGGAGATACCGATGCGAATATCGCTCACGCTGCCGTCCTCACTGCCGG‑‑CCTTTGCCGGTCGCACTTTCAGAGCGACCGAACAAGGAACCGGCA   >  1:34805/1‑119                                           CTTGCGCCAGGGGCCATAGCGCCACCCGGAGATACCGATGCGAATATCGCTCACGCTGCCGTCCTCACTGCCGG‑‑CCTTTGCCGGTCGCACTTTCAGAGCGACCGAACAAGGAACCGGCA   <  2:34805/119‑1                                                                                                                                                                      TGCCAGTTCATCGTCCTGTTTCAGGCCTTTGGGGTAGAAGTCCTTGCGCCAGGGGCCATAGCGCCACCCGGAGATACCGATGCGAATATCGCTCACGCTGCCGTCCTCACTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3701304‑3701419 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgg‑‑CCTTTGCCGGTCGCACTTTCAGAGCGACCGAACAAGGAACCGGCAG  <  NC_002947/3701458‑3701413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.