New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3920062 = | 15 (0.600) | 6 (0.250) | 6/258 | 2.2 | 26.9% | intergenic (+34/+59) | mobA/acs | molybdenum cofactor guanylyltransferase/acyl‑CoA synthetase |
? | NC_002947 | 3920118 = | 18 (0.740) | intergenic (+90/+3) | mobA/acs | molybdenum cofactor guanylyltransferase/acyl‑CoA synthetase |
TTTGCAGAAGGCCCTGCTGCGCGAGGCGGTGCAAGGGCTGGAGTGCGCCGAGAGTGATCGCCGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCGGG > NC_002947/3919926‑3920211 | gcacttcaaggtgccccggtatttccgttttgtcgacgagttcccgatgacggtgacgggcaaggtgcagaaattccggatgcgcgagatcagggtcgaagagctgaaagcaacggtcttgcccaagatttgaaccGCCAGCAGGgccgc < 1:111588‑M1/14‑1 (MQ=255) ctgcGCGAGGCGGTGCAAGGGCTGGAGTGCGCCGAGAGTGATCGCCGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAAc < 1:207838/150‑1 (MQ=255) gAGTGCGCCGAGAGTGATCGCCGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAg > 1:133033/1‑150 (MQ=255) cccgaagcccgtggccgacaaggggcagaaactcccgatgcgcgagatcagtgtcgaagagctgaaagcaacggtctagcccaagatttgaaccGCCAGCAGAGCCGCCCTTTCGCGGGTGAACCCGCTGCTACCGGCGAGCGCGCAGGc > 2:111588‑M1/95‑150 (MQ=255) cgatgacggtgacgggcaaggtgcagaaattccggatgcgcgagatcagtgtcgaagagctgaaagcaacggccttgcccaagatttgaaccGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCgg > 2:551586‑M1/93‑150 (MQ=255) cgatgacggtgacgggcaaggtgcagaaattccggatgcgcgagatcagtgtcgaagagctgaaagcaacggccttgcccaagatttgaaccGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCgg < 1:551586‑M1/58‑1 (MQ=255) gcCAAGAGTGATCGCCGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGtt < 1:58380/150‑1 (MQ=255) tCGCCGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTggg > 2:288333/1‑150 (MQ=255) cGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAg < 1:288333/150‑1 (MQ=255) tAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCg > 2:235710/1‑150 (MQ=255) aagagctgaaagcaacggccttgcccaagatttgaaccGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCaaa > 1:460820‑M1/39‑102 (MQ=255) aagagctgaaagcaacggccttgcccaagatttgaaccGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCaaa < 2:460820‑M1/64‑1 (MQ=255) cTGAGGGCATGATACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCGGCGGCTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCAt > 1:510493/1‑150 (MQ=38) acacCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGGCCAGGCGGTTCAAATGTTGGGCTAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCt < 1:235710/150‑1 (MQ=255) acCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGAtc > 1:503582/1‑129 (MQ=255) acCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGAtc < 2:503582/129‑1 (MQ=255) gTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCgg < 1:245928/45‑1 (MQ=255) gTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCgg > 2:245928/1‑45 (MQ=255) tCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTgg < 1:38801/76‑1 (MQ=255) tCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTgg > 2:38801/1‑76 (MQ=255) tGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCg > 1:588957/1‑150 (MQ=255) GCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCggg < 1:387792‑M1/150‑1 (MQ=255) | TTTGCAGAAGGCCCTGCTGCGCGAGGCGGTGCAAGGGCTGGAGTGCGCCGAGAGTGATCGCCGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCGGG > NC_002947/3919926‑3920211 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |