| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3920062 = | 15 (0.600) | 6 (0.250) | 6/258 | 2.2 | 26.9% | intergenic (+34/+59) | mobA/acs | molybdenum cofactor guanylyltransferase/acyl‑CoA synthetase |
| ? | NC_002947 | 3920118 = | 18 (0.740) | intergenic (+90/+3) | mobA/acs | molybdenum cofactor guanylyltransferase/acyl‑CoA synthetase | |||||
GCGCCGAGAGTGATCGCCGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCGGGAACTCGTCGACAAAACGGAAATACCGGGGCACCTTGAAGTGC > NC_002947/3919970‑3920253 | cgatgacggtgacgggcaaggtgcagaaattccggatgcgcgagatcagtgtcgaagagctgaaagcaacggccttgcccaagatttgaaccGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCgg > 2:551586‑M1/93‑150 (MQ=255)cgatgacggtgacgggcaaggtgcagaaattccggatgcgcgagatcagtgtcgaagagctgaaagcaacggccttgcccaagatttgaaccGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCgg < 1:551586‑M1/58‑1 (MQ=255) gcCAAGAGTGATCGCCGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGtt < 1:58380/150‑1 (MQ=255) tCGCCGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTggg > 2:288333/1‑150 (MQ=255) cGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAg < 1:288333/150‑1 (MQ=255) tAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCg > 2:235710/1‑150 (MQ=255) aagagctgaaagcaacggccttgcccaagatttgaaccGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCaaa < 2:460820‑M1/64‑1 (MQ=255) aagagctgaaagcaacggccttgcccaagatttgaaccGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCaaa > 1:460820‑M1/39‑102 (MQ=255) cTGAGGGCATGATACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCGGCGGCTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCAt > 1:510493/1‑150 (MQ=38) acacCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGGCCAGGCGGTTCAAATGTTGGGCTAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCt < 1:235710/150‑1 (MQ=255) acCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGAtc > 1:503582/1‑129 (MQ=255) acCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGAtc < 2:503582/129‑1 (MQ=255) tttgaaccgcctgcgcgctcgcccgtaggagcgggttcacccgcgaaagggcggccctgctggcGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCtt < 2:460820‑M2/38‑1 (MQ=255) tttgaaccgcctgcgcgctcgcccgtaggagcgggttcacccgcgaaagggcggccctgctggcGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCtt > 1:460820‑M2/65‑102 (MQ=255) tCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTgg < 1:38801/76‑1 (MQ=255) tCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTgg > 2:38801/1‑76 (MQ=255) cggggCAGCAGGGCCGCCCTTTCGCGGGTGACACCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATc > 2:133033‑M1/6‑150 (MQ=255) tGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCg > 1:588957/1‑150 (MQ=255) ccgcctgcgcgctcgcccgtaggagcgggttcacccgcgaaagggcggccctgctggcGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCg < 1:551586‑M2/92‑1 (MQ=255) ccgcctgcgcgctcgcccgtaggagcgggttcacccgcgaaagggcggccctgctggcGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCg > 2:551586‑M2/59‑150 (MQ=255) gcctgcgcgctcgccggtagcagcgggttcacccgcgaaagggcggctctgctggcGGTTCAAATCTTGGGCTAGACCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCGGGAGTTTCTGCCCCTTGTCGGCCACGGGCTTCggg > 2:111588‑M2/57‑150 (MQ=255) GCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCggg < 1:387792‑M1/150‑1 (MQ=255) aaCCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATc > 2:614520/1‑120 (MQ=255) aaCCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATc < 1:614520/120‑1 (MQ=255) cTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGtt > 2:151410/1‑45 (MQ=255) cTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGtt < 1:151410/45‑1 (MQ=255) tACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCGGGAACTCGTCGACAAAACg > 2:616766/1‑130 (MQ=255) tACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCGGGAACTCGTCGACAAAACg < 1:616766/130‑1 (MQ=255) gggCGAGCGCGCAGGCGGATAAAATCTTCAGCAAGGCCATTGCTATCACCTCTTCGACACAAAGCTCGCTCAGCCTGAATTTCTGCACCTTGCCCGTCACCGTCATCGGGAACTCGTCGACAAAACGGAAATACCGGGGCACCTTGAAGt > 2:543059/1‑150 (MQ=255) gcggccctgctggcGGTTCAAATCTTGGGCAAGACCGTTGCTTTCAGCTCTTCGACCCTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCGGGAACTCGTCGACAAAACGGAAATACCGGGGCACCTTGAAGTgc < 1:111588‑M2/136‑1 (MQ=255) | GCGCCGAGAGTGATCGCCGGCTAAGCAACTTCAACAGCCCGGAGCGGCTGCAGGACTGAGGGCATGACACCGTTAACACAGGTAGTTCACTGGCCAGCAGGGCCGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCGAGCGCGCAGGCGGTTCAAATCTTGGGCAAGGCCGTTGCTTTCAGCTCTTCGACACTGATCTCGCGCATCCGGAATTTCTGCACCTTGCCCGTCACCGTCATCGGGAACTCGTCGACAAAACGGAAATACCGGGGCACCTTGAAGTGC > NC_002947/3919970‑3920253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |