| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4524439 = | 22 (0.890) | 10 (0.450) | 8/236 | 1.5 | 34.1% | intergenic (+18/‑175) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein |
| ? | NC_002947 | 4524474 = | 19 (0.860) | intergenic (+53/‑140) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein | |||||
ATCGTCGCCGAGCTCAACGCCGTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGG > NC_002947/4524290‑4524586 | ccaggtcatgaacagctccttgaaggcgtgcatgacccctgtaggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaa < 1:438937‑M1/1‑1 (MQ=255) gtcgCCGAGCGCAACGCCGTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCGGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGca < 1:191429/150‑1 (MQ=255) atgaacagctccttgaaggcgtgcatgacccctgtaggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACaaa < 2:570480‑M1/8‑1 (MQ=255) aaCGCCGTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGcc > 1:251721/1‑150 (MQ=255) cttgaaggcgtgcatgacccctgtaggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcaatgccgtagaaAGCACAAACCCCGGCCACg < 1:315728‑M1/19‑1 (MQ=255) gTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCAc < 1:296516/150‑1 (MQ=255) cgtgcatgacccctgtaggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCgggg > 1:219154‑M1/124‑150 (MQ=255) tttcattacccctgtaggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGt > 2:315728‑M1/123‑150 (MQ=255) atgacccctgtaggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGTTtgt > 2:438937‑M1/119‑150 (MQ=255) agccGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCtt > 2:621463/1‑150 (MQ=255) aggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGTTtgt > 2:535‑M1/108‑139 (MQ=255) aggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGTTtgt < 1:535‑M1/32‑1 (MQ=255) tCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATa > 1:334405/1‑150 (MQ=255) tacGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAACTGATATCTg > 1:470967/1‑150 (MQ=255) cTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCtt < 2:244215/150‑1 (MQ=255) tGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCttt < 2:334405/150‑1 (MQ=255) cGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAg < 1:621463/150‑1 (MQ=255) ccAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCcgc > 1:153976/1‑150 (MQ=255) cAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTAccc > 1:37843/1‑147 (MQ=255) cAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTAccc < 2:37843/147‑1 (MQ=255) aGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGaa > 1:570480/1‑150 (MQ=255) aGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTAAACCcgctcc < 2:126894/150‑4 (MQ=255) cccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGttt > 2:105489‑M1/51‑80 (MQ=255) cccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGttt < 1:105489‑M1/30‑1 (MQ=255) ccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGttt > 2:302183‑M1/50‑79 (MQ=255) ccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGttt < 1:302183‑M1/30‑1 (MQ=255) tCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCg > 1:587757/1‑150 (MQ=255) gCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATc < 1:617239/147‑1 (MQ=255) gCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATc > 2:617239/1‑147 (MQ=255) ggTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGaa > 1:552189/1‑150 (MQ=255) gTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTg > 2:370116/1‑56 (MQ=255) gTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTGTCTg < 1:370116/56‑1 (MQ=255) ttCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAAcc < 1:366749/150‑1 (MQ=255) aCAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAggg < 2:552189/150‑1 (MQ=255) | ATCGTCGCCGAGCTCAACGCCGTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGG > NC_002947/4524290‑4524586 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |