| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4524439 = | 22 (0.890) | 10 (0.450) | 8/236 | 1.5 | 34.1% | intergenic (+18/‑175) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein |
| ? | NC_002947 | 4524474 = | 19 (0.860) | intergenic (+53/‑140) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein | |||||
AGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGG > NC_002947/4524325‑4524622 | agccGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCtt > 2:621463/1‑150 (MQ=255) tCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATa > 1:334405/1‑150 (MQ=255) tacGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAACTGATATCTg > 1:470967/1‑150 (MQ=255) cTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCtt < 2:244215/150‑1 (MQ=255) tGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCttt < 2:334405/150‑1 (MQ=255) cGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAg < 1:621463/150‑1 (MQ=255) ccAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCcgc > 1:153976/1‑150 (MQ=255) cAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTAccc > 1:37843/1‑147 (MQ=255) cAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTAccc < 2:37843/147‑1 (MQ=255) aGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGaa > 1:570480/1‑150 (MQ=255) aGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTAAACCcgctcc < 2:126894/150‑4 (MQ=255) tCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCg > 1:587757/1‑150 (MQ=255) gCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATc > 2:617239/1‑147 (MQ=255) gCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATc < 1:617239/147‑1 (MQ=255) ggTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGaa > 1:552189/1‑150 (MQ=255) gTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTg > 2:370116/1‑56 (MQ=255) gTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTGTCTg < 1:370116/56‑1 (MQ=255) ttCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAAcc < 1:366749/150‑1 (MQ=255) aCAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAggg < 2:552189/150‑1 (MQ=255) acaaaccccggtgcgtggccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCt < 1:535‑M2/107‑1 (MQ=255) acaaaccccggtgcgtggccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCt > 2:535‑M2/33‑139 (MQ=255) acaaaccccggtgcgtggccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCAt > 2:438937‑M2/33‑150 (MQ=255) ACAAACCCCGGCCCCGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCGGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCAt > 2:251721‑M1/1‑150 (MQ=255) aaaccccggtgcgtggccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCggg < 1:105489‑M2/50‑1 (MQ=255) aaaccccggtgcgtggccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCggg > 2:105489‑M2/31‑80 (MQ=255) aaaccccggtgcgtggccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCgg > 2:302183‑M2/31‑79 (MQ=255) aaaccccggtgcgtggccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCgg < 1:302183‑M2/49‑1 (MQ=255) AAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTggcg < 2:610550‑M1/53‑1 (MQ=255) AAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTggcg > 1:610550‑M1/1‑53 (MQ=255) accccggtgcgtggccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTaatgaaa > 2:315728‑M2/29‑147 (MQ=255) ccccggtgcgtggccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACg > 1:219154‑M2/28‑150 (MQ=255) CCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTc < 1:515633‑M1/131‑1 (MQ=255) CCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTc > 2:515633‑M1/1‑131 (MQ=255) CCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGcc < 2:371464‑M1/150‑1 (MQ=255) cgtggccggggtttgtgctTTCTACGGCATTGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAg < 1:315728‑M2/131‑1 (MQ=255) tttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCAt < 2:570480‑M2/142‑1 (MQ=255) tTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTgg < 1:438937‑M2/149‑1 (MQ=255) | AGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGG > NC_002947/4524325‑4524622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |