New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 337811	48 (0.830)	16 (0.350)	16/206	2.4	26.3%	intergenic (‑58/+71)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease
	?	NC_002947	= 337839	52 (1.140)					intergenic (‑86/+43)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease

AACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAA  >  NC_002947/337695‑337983                                                                                                                                                   |                                                                                                                                                 aaCTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGGTACacctg                                                                                                                                             <  2:1230909‑M2/150‑6 (MQ=255) aaCTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctg                                                                                                                                             <  2:90943‑M2/150‑6 (MQ=255)  aCTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCTACAGGTATATCGCC‑A‑CATTCAAGGTTGGCGCTACacctgt                                                                                                                                            >  1:1427192‑M2/1‑144 (MQ=255)    tGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGGTTTGAGGGCCTCTTCGCGGGCACGCCGGCTCCCACAGGGATAGAGCC‑A‑CCTTCAAGGTTAGCGCTACacctgtgg                                                                                                                                          <  1:86666‑M2/150‑9 (MQ=255)      gTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctgtggga                                                                                                                                        <  1:952658‑M2/150‑11 (MQ=255)           gggCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcggg                                                                                                                                   <  2:342350‑M2/150‑16 (MQ=255)                tGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgc                                                                                                                              <  1:1392918‑M2/150‑21 (MQ=255)                             ttAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCC‑AACCTTGAATGT‑GGCGCTATacctgtgg                                                                                                                                          >  1:1338742‑M2/1‑117 (MQ=255)                             ttAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCC‑AACCTTGAATGT‑GGCGCTATacctgtgg                                                                                                                                          <  2:1338742‑M2/125‑9 (MQ=255)                             ttAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGcagtc                                                                                                                 >  2:1409296/1‑150 (MQ=255)                              tAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGcagtca                                                                                                                <  2:1392918/150‑1 (MQ=255)                                   gggggCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCC‑AACCTTGAATGT‑GGCGCTATacctgtggga                                                                                                                                        <  1:614815‑M2/121‑11 (MQ=255)                                   gggggCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCC‑AACCTTGAATGT‑GGCGCTATacctgtggga                                                                                                                                        >  2:614815‑M2/1‑111 (MQ=255)                                      ggCTGTGGAGGTGGTTGGGCATGACAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGACGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAgcgc                                                                                                        >  2:833048/1‑147 (MQ=255)                                         tgtgGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCC‑AACCTTGAATGT‑GGCGCTATacctgtg                                                                                                                                           >  2:1468189‑M2/1‑105 (MQ=255)                                         tgtgGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCACTACACCTGTGGGAGCGGACGTGCCCGCGAAGCAGTCAGTGAGGTCTCa                                                                                                     >  1:1454163/1‑150 (MQ=255)                                             gAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCCCAGGCATAGCGGC‑T‑CAGTCCAGGTTGGCGCTACACCTGTGGAAGCGGGCGTGCCCGCGAAGCAGTTAGTGAGGCCTCAGCgg                                                                                                 >  1:1380153/1‑150 (MQ=38)                                              aGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGc                                                                                                <  2:952658/150‑1 (MQ=255)                                                gtggtTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCt                                                                                              >  2:1171665/1‑150 (MQ=255)                                                      gggCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTggcag                                                                                        <  1:1484344/150‑1 (MQ=255)                                                        gCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTggcaggc                                                                                      >  1:563920/1‑150 (MQ=255)                                                         cATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTgg                                                                                           <  2:155172/144‑1 (MQ=255)                                                         cATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTgg                                                                                           >  1:155172/1‑144 (MQ=255)                                                           tGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGATATAGCCCC‑A‑CATTCCAGGGTGGCGCTACAACTGTGGGAGCGGGCGTGCGCGCGAAGCGGTGAGTGAGTTCTCAGCGGCCTTGGCCGGCATc                                                                                   >  2:317487/1‑150 (MQ=37)                                                             gCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgcccgcgaa                                                                                                                       >  1:1145696‑M2/1‑85 (MQ=255)                                                             gCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgcccgcgaa                                                                                                                       <  2:1145696‑M2/112‑28 (MQ=255)                                                              cAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCGGCTCCCACAGGAATAGCGCC‑T‑CATTCAAGGTTGGCGCTACACCGGTGGGAGCGTGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGAGGCGTGGGCAGGCATCCAc                                                                                >  2:980258/1‑150 (MQ=38)                                                                 ggATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCAcgcg                                                                             >  1:6224/1‑150 (MQ=255)                                                                    cgtgtgGTGGTTTCGAGGGTCTCTTCGCGGGCACGCCCGCGCCCACAGGTATAGGGAC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCaa                                                                          <  2:86666/149‑1 (MQ=38)                                                                          gtggtTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCa                                                                                                     <  1:1441874/117‑1 (MQ=255)                                                                          gtggtTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCa                                                                                                     >  2:1441874/1‑117 (MQ=255)                                                                                    gggCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCagcagc                                                          <  1:1171665/150‑1 (MQ=255)                                                                                        ctctTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCCGTCCGTGAGGTCGCAGGGGCCTTGGCAGGCGTCCACGCGCAACCAGCGCTCCAGGAGCTTGa                                                      >  2:790809/1‑150 (MQ=37)                                                                                         tctTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGGGCTACACCTGTGGGAGCGGGCGTGCACCCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGaa                                                     <  1:850320/150‑1 (MQ=255)                                                                                                      gCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCGAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGc                                        >  1:922623/1‑150 (MQ=255)                                                                                                        ccGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCt                                                         <  2:189328/131‑1 (MQ=255)                                                                                                        ccGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCt                                                         >  1:189328/1‑131 (MQ=255)                                                                                                        ccGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCAt                                      >  1:917594/1‑150 (MQ=255)                                                                                                          gCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGca                                                                                                                    >  2:1468297/1‑70 (MQ=255)                                                                                                          gCTCCCACAGGTATAGCGCC‑A‑AATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGca                                                                                                                    <  1:1468297/70‑1 (MQ=255)                                                                                                            tCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAAc                                  <  2:1380153/150‑1 (MQ=255)                                                                                                              ccACAGGTGTAGCGCCAA‑CCTTGAATG‑TGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACga                                >  2:972781/1‑150 (MQ=21)                                                                                                              ccACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACga                                <  2:6224/150‑1 (MQ=255)                                                                                                              ccACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACga                                >  1:858355/1‑150 (MQ=255)                                                                                                               cacaGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgcccaaccacctccaca                                                                     >  1:1468189‑M2/1‑35 (MQ=255)                                                                                                                acaGGTGTAGCGCCAA‑CCTTGAATG‑TGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACgaga                              >  2:619322/1‑150 (MQ=25)                                                                                                                acaGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGCGCGGGCGTTCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACgaga                              <  1:90943/150‑1 (MQ=255)                                                                                                                acaGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCt                                                         <  2:519399/123‑1 (MQ=255)                                                                                                                acaGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCt                                                         >  1:519399/1‑123 (MQ=255)                                                                                                                acaGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGaa                                   <  2:278595/145‑1 (MQ=255)                                                                                                                acaGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGaa                                   >  1:278595/1‑145 (MQ=255)                                                                                                                acaGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACgaga                              <  1:342350/150‑1 (MQ=255)                                                                                                                acaGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACgaga                              <  1:1409296/150‑1 (MQ=255)                                                                                                                 caGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACgagag                             >  1:71155/1‑149 (MQ=255)                                                                                                                 caGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGAt                             >  1:70034/1‑150 (MQ=255)                                                                                                                    gTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgtccgcgaagaggccctcaaaaccaccacacatccttgccatgcccaaccacctcca                                                                       <  1:1179008‑M2/105‑76 (MQ=255)                                                                                                                    gTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgtccgcgaagaggccctcaaaaccaccacacatccttgccatgcccaaccacctcca                                                                       >  2:1179008‑M2/1‑30 (MQ=255)                                                                                                                    gTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgcccaaccacctccacagcccccacctaagcacccgcttccaggccctcgaccagttcc                           <  2:807706‑M2/149‑120 (MQ=255)                                                                                                                    gTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgcccaaccacctccacagcccccacctaagcacccgcttccaggccctcgaccagttcc                           >  1:807706‑M2/1‑30 (MQ=255)                                                                                                                    gTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCAc                          >  2:1436707/1‑150 (MQ=255)                                                                                                                    gTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCAc                          <  2:563920/150‑1 (MQ=255)                                                                                                                    gTATAGCGAC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgcccaaccacctcca                                                                       >  1:747925‑M2/1‑30 (MQ=255)                                                                                                                    gTATAGCGAC‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgcccaaccacctcca                                                                       <  2:747925‑M2/105‑76 (MQ=255)                                                                                                                      ataGCGCC‑A‑CATTCAAGGTTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCa                        >  1:463818/1‑150 (MQ=255)                                                                                                                      ataGCGCC‑A‑CATTCAAGGTTGGCACTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCa                        <  2:1454163/150‑1 (MQ=255)                                                                                                                       taGCGCC‑A‑CATTCAAGGTTGGCGCTATacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgcccaaccacctccaca                                                                     >  2:226741‑M2/1‑27 (MQ=255)                                                                                                                       taGCGCC‑A‑CATTCAAGGTTGGCGCTATacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgcccaaccacctccaca                                                                     <  1:226741‑M2/104‑78 (MQ=255)                                                                                                                        aGCGCG‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAgg                      <  2:305444/150‑1 (MQ=255)                                                                                                                         gcgcC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGt                     >  2:103509/1‑150 (MQ=255)                                                                                                                            cc‑A‑CATTCAAGGTTGGCGCTACacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgcccaaccacctccacagcccccacctaagcacccgcttccaggccctcgaccagttcctgatcgagc                  <  1:178799‑M2/150‑129 (MQ=255)                                                                                                                             c‑a‑caTTCAAGGTTGGCGCTATacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgc                                                                                    <  2:983000‑M2/83‑63 (MQ=255)                                                                                                                             c‑a‑caTTCAAGGTTGGCGCTATacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgc                                                                                    >  1:983000‑M2/1‑21 (MQ=255)                                                                                                                             c‑a‑caTTCAAGGTTGGCGCTACacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgcc                                                                                   >  2:592951‑M2/1‑21 (MQ=255)                                                                                                                             c‑a‑caTTCAAGGTTGGCGCTACacctgtgggagcgggcgtgcccgcgaagaggccctcaaaaccaccacacatccttgccatgcc                                                                                   <  1:592951‑M2/84‑64 (MQ=255)                                                                                                                                    tCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCCTGAAGCCTTGCACCAGTATGAACGAGAACACCAGGTAGAACACGc            >  1:257013/1‑150 (MQ=255)                                                                                                                                          ttGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAgcgc                                                                   <  2:469448/89‑1 (MQ=255)                                                                                                                                          ttGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAgcgc                                                                   >  1:469448/1‑89 (MQ=255)                                                                                                                                           tGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTgcggc     <  1:972781/150‑1 (MQ=255)                                                                                                                                              cggtACACCTGTGGGGGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCgaa  <  1:833048/147‑1 (MQ=255)                                                                                                                                              cgcTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCgaa  <  1:306666/150‑1 (MQ=255)                                                                                                                                                 tACacctgtgggagcgggcgtgcccgcgaagcggccctcaaaaccaccacacatccttgccatgcccaaccacctccacagcccccacctaagcacccgcttccaggccctcgaccagttcctgatc                      >  2:161053‑M2/1‑3 (MQ=255)                                                                                                                                                 tACacctgtgggagcgggcgtgcccgcgaagcggccctcaaaaccaccacacatccttgccatgcccaaccacctccacagcccccacctaagcacccgcttccaggccctcgaccagttcctgatc                      <  1:161053‑M2/127‑125 (MQ=255)                                                                                                                                                   |                                                                                                                                                 AACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑A‑CATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAA  >  NC_002947/337695‑337983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.