| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 41794 | 70 (0.940) | 4 (0.060) | 4/228 | NT | 5.9% | intergenic (+36/‑263) | oprP/PP_0039 | porin P/hypothetical protein |
| ? | NC_002947 | = 41803 | 65 (0.970) | intergenic (+45/‑254) | oprP/PP_0039 | porin P/hypothetical protein | |||||
GTACGTCAACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/41635‑41794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaagccggaagcACGTTGA‑GCGCTTCCGGCTTTCTCACGTCAGACTGATGAGAGGGATCAGAAGACGTATTGCAGGCGGGTCACGATGGCATTGCCGCTGTCGTCGCCCACGGTGTTCTCGTTGTTGTCGGTGCGCACGTTGATGTAGTTGGCACTG < NC_002947/41803‑41659 GTACGTCAACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAA > 2:650119/1‑150GTACGTCAACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAA > 2:508099/1‑150 TACGTCAACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAA < 1:650119/150‑1 GTCAACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGTCGTGAGAAAGCC < 1:538565/150‑1 TCAACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACCAAGAGAACACCGTGGGCGCCGACAGTGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCG > 1:231680/1‑150 TCAACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCG > 1:371979/1‑150 TCAACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCG > 1:1174276/1‑150 AACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGA > 2:1406048/1‑150 GAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGC < 2:82797/150‑1 CACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAA < 1:1532807/92‑1 CACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAA > 2:1532807/1‑92 TCATCAGTCTGACGTGAGAAAGCCGGAAGCACGTTGA‑GCGCTTCCG > 2:1371656/1‑46 TCATCAGTCTGACGTGAGAAAGCCGGAAGCACGTTGA‑GCGCTTCCG < 1:1371656/46‑1 TCTGACGTGAGAAAGCCGGAAGCGC‑TCAACGTGCTTCCGGCTTTCTCACGTCAGACTGATGAGAGGGATCAGAAGACGTATTGCAGGCGGGTCACGATGGCATTGCCGCTGTCGTCGCCCACGGTGTTCTCGTTG > 2:1505718/1‑135 TCTGACGTGAGAAAGCCGGAAGCGC‑TCAACGTGCTTCCGGCTTTCTCACGTCAGACTGATGAGAGGGATCAGAAGACGTATTGCAGGCGGGTCACGATGGCATTGCCGCTGTCGTCGCCCACGGTGTTCTCGTTG < 1:1505718/135‑1 AAAGCCGGAAGCACGTTGA‑GCGCTTCCGGCTTTCTCACGTCAGACTGATGAGAGGGATCAGAAGACGTATTGCAGGCGGGTCACGATGGCATTGCCGCTGTCGTCGCCCACGGTGTTCTCGTTGTTGTCGGTGCGCACGTTGATGTAGTT < 1:1835723/150‑1 AGCCGGAAGCACGTTGA‑GCGCTTCCGGCTTTCTCACGTCAGACTGATGAGAGGGATCAGAAGACGTATTGCAGGCGGGTCACGATGGCATTGCCGCTGTCGTCGCCCACGGTGTTCTCGTTGTTGTCGGTGCGCACGTTGATGTAGTTGG < 2:1566130/150‑1 GCCGGAAGCACGTTGA‑GCGCTTCCGGCTTTCTCACGTCAGACTGATGAGAGGGATCAGAAGACGTATTGCAGGCGGGTCACGATGGCATTGCCGCTGTCGTCGCCCACGGTGTTCTCGTTGTTGTCGGTGCGCACGTTGATGTAGTTGGC < 2:1558081/150‑1 GAAGCACGTTGA‑GCGCTTCCGGCTTTCTCACGTCAGACTGATGAGAGGGATCAGAAGACGTATTGCAGGCGGGTCACGATGGCATTGCCGCTGTCGTCGCCCACGGTGTTCTCGTTGTTGTCGGTGCGCACGTTGATGTAGTTGGCACTG > 2:371979/1‑150 GTACGTCAACGAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/41635‑41794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaagccggaagcACGTTGA‑GCGCTTCCGGCTTTCTCACGTCAGACTGATGAGAGGGATCAGAAGACGTATTGCAGGCGGGTCACGATGGCATTGCCGCTGTCGTCGCCCACGGTGTTCTCGTTGTTGTCGGTGCGCACGTTGATGTAGTTGGCACTG < NC_002947/41803‑41659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |