New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 4179470 (0.940)4 (0.060) 4/228 NT 5.9% intergenic (+36/‑263) oprP/PP_0039 porin P/hypothetical protein
?NC_002947 = 41803 65 (0.970)intergenic (+45/‑254) oprP/PP_0039 porin P/hypothetical protein

GAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGATTGCCGCGTCGGGCTTTGCATGGTGG  >  NC_002947/41645‑41938
                                                                                                                                                     |                                                                                                                                                 
gAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGC                                                                                                                                                   <  2:82797‑M1/150‑1 (MQ=255)
  ggCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAgcgc                                                                                                                                                 <  1:53184/150‑1 (MQ=255)
      gTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCaa                                                                                                                                            >  2:1597928/1‑150 (MQ=255)
         aaaGTCAGTGCCAACTACATCAACGTGCGCACCGAAAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAGGCCGGAAGCGCGCAACGt                                                                                                                                         <  2:1755654/150‑1 (MQ=255)
              cAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTgcttc                                                                                                                                    >  2:371979‑M2/1‑145 (MQ=255)
                gTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACg                                                                                                                                          <  2:1806089/142‑1 (MQ=255)
                gTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACg                                                                                                                                          <  2:1801567/142‑1 (MQ=255)
                gTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACg                                                                                                                                          >  1:1806089/1‑142 (MQ=255)
                gTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACg                                                                                                                                          >  1:1801567/1‑142 (MQ=255)
                  gCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTgcttccggc                                                                                                                                <  2:1558081‑M2/150‑10 (MQ=255)
                   ccAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTgcttccggct                                                                                                                               <  2:1566130‑M2/150‑11 (MQ=255)
                     aaCTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTgcttccggcttt                                                                                                                             <  1:1835723‑M2/150‑13 (MQ=255)
                        tACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCTCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCt                                                                                                                          <  2:1892367/150‑1 (MQ=255)
                          cATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGt                                                                                                                        >  1:1738697/1‑150 (MQ=255)
                             cAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTc                                                                                                                     >  2:394989/1‑150 (MQ=255)
                              aaCGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCCATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCt                                                                                                                    >  1:144773/1‑150 (MQ=255)
                                  tGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAg                                                                                                                <  1:1406048/150‑1 (MQ=255)
                                    cgcACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGt                                                                                                              <  2:1835723/150‑1 (MQ=255)
                                     gcACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTg                                                                                                             >  1:1498875/1‑150 (MQ=255)
                                      cACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGa                                                                                                            <  2:1044793/150‑1 (MQ=255)
                                       aCCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGAt                                                                                                           >  2:1289820/1‑150 (MQ=255)
                                         cGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCa                                                                                                         >  2:1724408/1‑150 (MQ=255)
                                            caacaaCGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGc                                                                                                      <  1:1597928/150‑1 (MQ=255)
                                             aacaacGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCa                                                                                                     <  2:1908479/150‑1 (MQ=255)
                                               caacGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCACGTTGAGCgcttccggctttctcacgtcaga                                                                                                                  <  1:1505718‑M2/135‑24 (MQ=255)
                                               caacGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCACGTTGAGCgcttccggctttctcacgtcaga                                                                                                                  >  2:1505718‑M2/1‑112 (MQ=255)
                                                aacGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGa                                                                                                                 >  2:724397/1‑135 (MQ=255)
                                                aacGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGa                                                                                                                 <  1:724397/135‑1 (MQ=255)
                                                aacGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCAGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATgg                                                                                                  >  1:1806611/1‑150 (MQ=255)
                                                 acGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAAGGAACGGCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGa                                                                                                 >  1:496532/1‑150 (MQ=255)
                                                 acGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGa                                                                                                 >  1:730214/1‑150 (MQ=255)
                                                    agaACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAgcg                                                                                              <  1:394989/150‑1 (MQ=255)
                                                    agaACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAgcg                                                                                              <  2:616584/150‑1 (MQ=255)
                                                      aaCACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGcc                                                                                            <  2:1498875/150‑1 (MQ=255)
                                                       acacCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGccc                                                                                           <  2:1806611/150‑1 (MQ=255)
                                                         acCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCcctc                                                                                         >  1:187815/1‑150 (MQ=255)
                                                         acCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCcctc                                                                                         <  1:1724408/150‑1 (MQ=255)
                                                           cGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCcctcct                                                                                       >  1:156447/1‑150 (MQ=255)
                                                                gCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTAc                                                                                  >  1:1567943/1‑150 (MQ=255)
                                                                      acAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCtt                                                                            >  2:508146/1‑150 (MQ=255)
                                                                        aGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCcctcc                                                                                        >  2:1275698/1‑136 (MQ=255)
                                                                        aGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCcctcc                                                                                        <  1:1275698/136‑1 (MQ=255)
                                                                                    aTCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGa                                                              <  1:508099/150‑1 (MQ=255)
                                                                                      cGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGAcc                                                            <  2:1422905/150‑1 (MQ=255)
                                                                                            ccGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCa                                                                                                     <  1:709707/103‑1 (MQ=255)
                                                                                            ccGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCa                                                                                                     >  2:709707/1‑103 (MQ=255)
                                                                                            ccGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCtt                                                      >  2:1629246/1‑150 (MQ=255)
                                                                                            ccGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCtt                                                      >  1:1224575/1‑150 (MQ=255)
                                                                                            ccGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGACGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCtt                                                      >  2:1318146/1‑150 (MQ=255)
                                                                                            ccGCCTGCAATACGTATTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAGCGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGCGCGCCCTCCTCCTACCTGCTTTCGCTTACCGCTGACCGCCCtt                                                      >  2:88700/1‑150 (MQ=255)
                                                                                              gCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGc                                                    <  2:775527/150‑1 (MQ=255)
                                                                                                  gCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCaaa                                                >  2:1406352/1‑150 (MQ=255)
                                                                                                      tACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTc                                            >  1:1608650/1‑150 (MQ=255)
                                                                                                       aCGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAGCGTGCTTCCGGCTTTCCTGTTTCTGGAg                                                                                                                <  2:995438/81‑1 (MQ=255)
                                                                                                       aCGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAg                                                                                                                >  1:995438/1‑81 (MQ=255)
                                                                                                        cGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCgg                                          <  1:508146/150‑1 (MQ=255)
                                                                                                          tcttctGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCATACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCg                                        >  2:208671/1‑150 (MQ=255)
                                                                                                           cttctGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGa                                       >  1:1888861/1‑150 (MQ=255)
                                                                                                                gATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTgg                                                                                                                  >  1:61335/1‑70 (MQ=255)
                                                                                                                gATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTgg                                                                                                                  <  2:61335/70‑1 (MQ=255)
                                                                                                                  tCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCTCTCTTGCCAAAGCTCGGCGAATCTGAt                                <  2:1174276/150‑1 (MQ=255)
                                                                                                                  tCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCTCTCTTGCCAAAGCTCGGCGAATCTGAt                                <  2:231680/150‑1 (MQ=255)
                                                                                                                  tCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCaaa                                                >  2:1464516/1‑134 (MQ=255)
                                                                                                                  tCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCaaa                                                <  1:1464516/134‑1 (MQ=255)
                                                                                                                    ccTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGAtgt                              <  1:1629246/150‑1 (MQ=255)
                                                                                                                     ctctCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGAAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGAtgtg                             >  1:314023/1‑150 (MQ=255)
                                                                                                                      tctcATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGa                            >  1:1293976/1‑150 (MQ=255)
                                                                                                                        tcatcaGTCTGACGTGAGAAAGCCGGAAGCacgttgagcgcttccg                                                                                                                                   <  1:1371656‑M1/46‑17 (MQ=255)
                                                                                                                        tcatcaGTCTGACGTGAGAAAGCCGGAAGCacgttgagcgcttccg                                                                                                                                   >  2:1371656‑M1/1‑30 (MQ=255)
                                                                                                                        tcatcaGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGAtt                          >  2:1720518/1‑150 (MQ=255)
                                                                                                                        tcatcaGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGAtt                          >  2:1447817/1‑150 (MQ=255)
                                                                                                                          atcaGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGATTGc                        >  2:1674084/1‑150 (MQ=255)
                                                                                                                               tCTGACGTGAGAAAGCCGGAAGCgctcaacgtgcttccggctttctcacgtcagactgatgagagggatcagaagacgtattgcaggcgggtcacgatggcattgccgctgtcgtcgcccacggtgttctcgttg                                   <  1:1505718‑M1/135‑113 (MQ=255)
                                                                                                                               tCTGACGTGAGAAAGCCGGAAGCgctcaacgtgcttccggctttctcacgtcagactgatgagagggatcagaagacgtattgcaggcgggtcacgatggcattgccgctgtcgtcgcccacggtgttctcgttg                                   >  2:1505718‑M1/1‑23 (MQ=255)
                                                                                                                                cTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGATTGCCGCGTc                  <  1:342410/150‑1 (MQ=255)
                                                                                                                                     gTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGATTGCCGCGTCGGGCt             >  2:791549/1‑150 (MQ=255)
                                                                                                                                      tGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGAtgt                              <  1:1733119/132‑1 (MQ=255)
                                                                                                                                      tGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGAtgt                              >  2:1733119/1‑132 (MQ=255)
                                                                                                                                       gagaAAGCCGGAAGCGCTCAACGTGCTTCCGGCGATAGACTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGATTGCCGCGTCGGGCttt           <  1:1040284/150‑1 (MQ=255)
                                                                                                                                          aaaGCCGGAAGCacgttgagcgcttccggctttctcacgtcagactgatgagagggatcagaagacgtattgcaggcgggtcacgatggcattgccgctgtcgtcgcccacggtgttctcgttgttgtcggtgcgcacgttgatgtagtt         <  1:1835723‑M1/150‑139 (MQ=255)
                                                                                                                                          aaaGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGATTGCCGCGTCGGGCTTTGCa        <  1:416247/150‑1 (MQ=255)
                                                                                                                                           aaGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGATTGCCGCGTCGGGCTTTGCAt       <  1:1447817/150‑1 (MQ=255)
                                                                                                                                            aGCCGGAAGCacgttgagcgcttccggctttctcacgtcagactgatgagagggatcagaagacgtattgcaggcgggtcacgatggcattgccgctgtcgtcgcccacggtgttctcgttgttgtcggtgcgcacgttgatgtagttgg       <  2:1566130‑M1/150‑141 (MQ=255)
                                                                                                                                             gCCGGAAGCacgttgagcgcttccggctttctcacgtcagactgatgagagggatcagaagacgtattgcaggcgggtcacgatggcattgccgctgtcgtcgcccacggtgttctcgttgttgtcggtgcgcacgttgatgtagttggc      <  2:1558081‑M1/150‑142 (MQ=255)
                                                                                                                                              ccGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGATTGCCGCGTCGGGCTTTGCAtggt    <  2:156447/150‑1 (MQ=255)
                                                                                                                                               cGGAAGCGCTCAACGTgcttccggctttctcacgtcagactgatga                                                                                                           <  1:1371656‑M2/46‑31 (MQ=255)
                                                                                                                                               cGGAAGCGCTCAACGTgcttccggctttctcacgtcagactgatga                                                                                                           >  2:1371656‑M2/1‑16 (MQ=255)
                                                                                                                                                 gAAGCacgttgagcgcttccggctttctcacgtcagactgatgagagggatcagaagacgtattgcaggcgggtcacgatggcattgccgctgtcgtcgcccacggtgttctcgttgttgtcggtgcgcacgttgatgtagttggcactg  >  2:371979‑M1/1‑5 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
GAGGCGGTGAAAGTCAGTGCCAACTACATCAACGTGCGCACCGACAACAACGAGAACACCGTGGGCGACGACAGCGGCAATGCCATCGTGACCCGCCTGCAATACGTCTTCTGATCCCTCTCATCAGTCTGACGTGAGAAAGCCGGAAGCGCTCAACGTGCTTCCGGCTTTCCTGTTTCTGGAGGTGATCAAGCATGGAGCGCCCTCCTCCTACCTGCTTTCGCTTACCGATGACCGCTCTTGCCAAAGCTCGGCGAATCTGATGTGATTGCCGCGTCGGGCTTTGCATGGTGG  >  NC_002947/41645‑41938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.