| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 181541 | NA (NA) | 10 (0.140) | 10/246 | NT | NA | intergenic (+7/‑126) | PP_23SB/PP_r01 | 23S ribosomal RNA/5S ribosomal RNA |
| ? | NC_002947 | = 529685 | NA (NA) | intergenic (+18/‑102) | PP_23SC/PP_5SC | 23S ribosomal RNA/5S ribosomal RNA | |||||
TTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/181389‑181541‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatCTGC‑GTA‑GCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAG < NC_002947/529685‑529539 TTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC > 1:1055139/1‑150TTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC > 1:1263632/1‑150TTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC > 2:1585722/1‑150TTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC > 2:128099/1‑150TTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGC > 1:310066/1‑150 GCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAA < 2:272011/150‑1 CCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAAT < 1:859390/150‑1 CTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATC > 2:799010/1‑150 TCAAGATGAGATCTCACTGGGATGTCGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCT < 2:1230975/150‑1 TCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCT < 1:1139049/150‑1 TCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCT > 1:632055/1‑150 TCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCT > 1:1301522/1‑150 TCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGAGCCGTCGAAGACTACGACGTTGATAGGTTAGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTACGGCTTGACCATATAACACCCAGGCAATCT > 2:647843/1‑150 CAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATCCTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTG < 1:1679691/150‑1 TCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCCAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAA > 2:1313536/1‑134 TCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCCAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAA < 1:1313536/134‑1 GGGATCTTGAATCCCTTAACGGGACGTCGAAGAATACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGCGCTAACCACTCCTAATTGCCCGCACGGAGTGACCACATAACACCCAAGCAATCTGC‑GTA‑GCAGATTGCTTG‑G < 2:268430/150‑1 CCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAA < 1:600446/115‑1 CCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAA > 2:600446/1‑115 CTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAA > 1:1705970/1‑65 CTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAA < 2:1705970/65‑1 TTGACCATATAACACCCAAGCAATCTGC‑‑TACGCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAAC > 1:455210/1‑125 TTGACCATATAACACCCAAGCAATCTGC‑‑TACGCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAAC < 2:455210/125‑1 TTGACCATATAACACCCAAGCAATCTGC‑‑TACGCAGATTG‑TGGTGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAG > 1:657339/1‑150 CATATAACACCCAAGCAATCTGC‑‑TACGCAGATTG‑TGGTGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGAT > 1:1139920/1‑150 ATATAACACCCAAGCAATCTGC‑‑TACGCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAAC < 2:1268823/119‑1 ATATAACACCCAAGCAATCTGC‑‑TACGCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAAC > 1:1268823/1‑119 ACCCAAGCAATTTGCTGAC‑GCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGAT > 1:1889300/1‑150 ACCCAAGCAATCTGC‑TAC‑GCAGATTGTTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGG < 1:805627/138‑1 ACCCAAGCAATCTGC‑‑TACGCAGATTGTTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGG > 2:805627/1‑138 CCAAGCAATCTGC‑TAC‑GCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGG > 2:789161/1‑137 CCAAGCAATCTGC‑‑TACGCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGTGGATTCAAGATCCC > 2:1673820/1‑150 CCAAGCAATCTGC‑‑TACGCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCC > 1:1740879/1‑150 CCAAGCAATCTGC‑‑TACGCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGG < 1:789161/137‑1 AAGCAATCTGC‑TAC‑GCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAAAGCGGAAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAG > 1:959065/1‑150 AAGCAATCTGC‑‑TACGCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAG > 2:1753011/1‑150 AAGCAATCTGC‑‑TACGCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAG > 1:1830650/1‑150 GCAATCTGC‑‑TACGCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTG > 2:1475440/1‑150 CAATCTGC‑GTA‑GCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGA < 1:909077/150‑1 AATCTGC‑GTA‑GCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCACCGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAG > 1:1851399/1‑150 AATCTGC‑GTA‑GCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGC > 1:604444/1‑83 AATCTGC‑GTA‑GCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGC < 2:604444/83‑1 TTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/181389‑181541‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatCTGC‑GTA‑GCAGATTGCTTG‑GGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAG < NC_002947/529685‑529539 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |