New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 375245 = | 79 (1.060) | 4 (0.060) | 4/242 | NT | 5.3% | coding (532/1233 nt) | PP_0312 | electron transfer flavoprotein subunit alpha |
? | NC_002947 | 375282 = | 68 (0.960) | coding (569/1233 nt) | PP_0312 | electron transfer flavoprotein subunit alpha |
GTTGCAGGTCTTGCTGGCCGGCGCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCCGGGCGCTCGCCCAGCGCGGCACCCAGGCGCCGACCCAGTTCCCCGCCACCGGTGCGGCTGTCGGGCAGCAGCCAGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/375398‑375245 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcg‑GG‑‑‑GAACTGGGTCGGCGCCTGGGTGCCGCGCTGGGCGAGCGCCCGGCAACCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTGGCGGCT > NC_002947/375282‑375427 GTTGCAGGTCTTGCTGGCCGGCTCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCCGGGCGCTCGCCCAGCGCGGCACCCAGGCGCCGACCCAGTTCCCCGCCACCGGTGCGGCTGTCGGGCAGCAGCCAGT > 1:874850/1‑150 TTGCAGGTCTTGCTGGCCGGCGCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCCGGGCGCTCGCCCAGCGCGGCACCCAGGCGCCGACCCAGTTCCCCGCCACCGGTGCGGCTGTCGGGCAGCAGCCAGTG > 2:673355/1‑150 GCAGGTCTTGCTGGCCGGCGCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCCGGGCGCTCGCCCAGCGCGGCACCCAGGCGCCGACCCAGTTCCCCGCCACCGGTGCGGCTGTCGGGCAGCAGCCAGTGGC > 2:1337476/1‑150 GTCTTGCTGGCCGGCGCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCCGGGCGCTCGCCCAGCGCGGCACCCAGGCGCCGACCCAGTTCCCCGCCACCGGTGCGGCTGTCGGGCAGCAGCCAGTtcgcgcc > 2:1215035/1‑143 CCCAGTTCCCCGCCACCGGTGCGGCTGTCGGGCAGCAGCCAGTGGCGCGGCGCGAACTGGGTCGGCGCCTGGGTGCCGCGCTGGGCGAGCGCCCGGCAACCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCG > 1:790474/1‑150 CCAGTTCCCCGCCACCGGTGCGGCTGTCGGGCAGCAGCCAGTGGCG‑GG‑‑‑GAACTGGGTCGGCGCCTGGGTGCCGCGCTGGGCGAGCGCCCGGCAACCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAG > 1:1338401/1‑150 CCGCCACCGGTGCGGCTGTCGGGCAGCAGCCAGTGGCG‑GG‑‑‑GAACTGGGTCGGCGCCTGGGTGCCGCGCTGGGCGAGCGCCCGGCAACCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCT < 1:689590/150‑1 CCGCCACCGGTGCGGCTGTCGGGCAGCAGCCAGTGGCG‑GG‑‑‑GAACTGGGTCGGCGCCTGGGTGCCGCGCTGGGCGAGCGCCCGGCAACCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCT > 2:689590/1‑150 TGGCG‑GG‑‑‑GAACTGGGTCGGCGCCTGGGTGCCGCGCTGGGCGAGCGCCCGGCAACCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTGGCGGg < 2:1338401/150‑2 TGGCG‑GG‑‑‑GAACTGGGTCGGCGCCTGGGTGCCGCGCTGGGCGAGCGCCCGGCAACCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTAGCGGC > 2:30756/1‑150 GGCG‑GG‑‑‑GAACTGGGTCGGCGCCTGGGTGCCGCGCTGGGCGAGCGCCCGGCAACCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTGGCGGCT < 2:646943/150‑1 GTTGCAGGTCTTGCTGGCCGGCGCCGGCGCGGCCGATACACTGGCCGTCCTTGACCTGCCATACCCGGGTTGCCGGGCGCTCGCCCAGCGCGGCACCCAGGCGCCGACCCAGTTCCCCGCCACCGGTGCGGCTGTCGGGCAGCAGCCAGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/375398‑375245 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcg‑GG‑‑‑GAACTGGGTCGGCGCCTGGGTGCCGCGCTGGGCGAGCGCCCGGCAACCCGGGTATGGCAGGTCAAGGACGGCCAGTGTATCGGCCGCGCCGGCGCCGGCCAGCAAGACCTGCAACGCACTGTGCCGCGCCTGATCCTGGCGGCT > NC_002947/375282‑375427 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |