| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 713081 = | 99 (1.330) | 6 (0.080) | 5/242 | NT | 6.0% | coding (67/531 nt) | lspA | lipoprotein signal peptidase |
| ? | NC_002947 | 713119 = | 93 (1.310) | coding (105/531 nt) | lspA | lipoprotein signal peptidase | |||||
CCCGCTCCGTCAGCCAGGAAGCTGAACGCGGCACCGGTGTTGTAAGCCAGGGTCCAGCTGAAGTAGTCAGGAATGACCACGATCTGCTGGTACATGGTCAGGGCGTTGTTGAAGTACAGCTTGGTGG‑CCTGGTCGATGACCAGGACCAGCAAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/713235‑713081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagctGTACTTCAACAACGCCCTGACCATGTACCAGCAGATCGTGGTCATTCCTGACTACTTCAGCTGGACCCTGGCTTACAACACCGGTGCCGCGTTCAGCTTCCTGGCTGACGGAGCGGGTTGGCAGCGCTGGTTGTTCGCCCTGAT > NC_002947/713119‑713262 CCCGCTCCGTCAGCCAGGAAGCTGAACGCGGCACCGGTGTTGTAAGCCAGGGTCCAGCTGAAGTAGTCAGGAATGACCACGATCTGCTGGTACATGGTCAGGGCGTTGTTGAAGTACAGCTTGGTGG‑CCTGGTCGATGACCAGGACCAGC < 2:621154/150‑1 CGCTCCGTCAGCCAGGAAGCTGAACGCGGCACCGGTGTTGTAAGCCAGGGTCCAGCTGAAGTAGTCAGGAATGACCACGATCTGCTGGTACATGGTCAGGGCGTTGTTGAAGTACAGCTTGGTGG‑CCTGGTCGATGACCAGGACCAGCAA < 2:435910/150‑1 ACCGGTGTTGTAAGCCAGGGTCCAGCTGAAGTAGTCAGGAATGACCACGATCTGCTGGTACATGGTCAGGGCGTTGTTGAAGTACAGCTTGCTGGTCCTGGTCATCGACCAGG‑CCACCAAGCTGTACTTCAA < 1:1904439/132‑1 ACCGGTGTTGTAAGCCAGGGTCCAGCTGAAGTAGTCAGGAATGACCACGATCTGCTGGTACATGGTCAGGGCGTTGTTGAAGTACAGCTTGCTGGTCCTGGTCATCGACCAGG‑CCACCAAGCTGTACTTCAA > 2:1904439/1‑132 TTGGTGG‑CCTGGTCGATGACCAGGACCAGCAAGCTGTACTTCAACAACGCCCTGACCATGTACCA < 1:1062233/65‑1 TTGGTGG‑CCTGGTCGATGACCAGGACCAGCAAGCTGTACTTCAACAACGCCCTGACCATGTACCA > 2:1062233/1‑65 G‑CCTGGTCGATGACCAGG‑CCACCAAGCTGTACTTCAACAACGCCCTGACCATGTACCAGCAGATCGTGGTCATTCCTGACTACTTCAGCTGGACCCTGGCTTACAACACCGGTGCCGCGTTCAGCTTCCTGGCTGACGGAGCGGGTTGGC > 2:351678/1‑150 G‑CCTGGTCGATGACCAGG‑CCACCAAGCTGTACTTCAACAACGCCCTGACCATGTACCAGCAGATCGTGGTCATTCCTGACTACTTCAGCTGGACCCTGGCTTACAACACCGGTGCCGCGTTCAGCTTCCTGGCTGACGGAGCGGGTTGGC > 2:62228/1‑150 CAAGCTGTACTTCAACAACGCCCTGACCATGTACCAGCAGATCGTGGTCATTCCTGACTACTTCAGCTGGACCCTGGCTTACAACACCGGTGCCGCGTTCAGCTTCCTGGCTGACGGAGCGGGTTGGCAGCGCTGGTTGTTCGCCCTGAT > 1:1208057/1‑150 CAAGCTGTACTTCAACAACGCCCTGACCATGTACCAGCAGATCGTGGTCATTCCTGACTACTTCAGCTGGACCCTGGCTTACAACACCGGTGCCGCGTTCAGCTTCCTGGCTGACGGAGCGGGTTGGCAGCGCTGGTTGTTCGCCCTGAT > 2:1297388/1‑150 CAAGCTGTACTTCAACAACGCCCTGACCATGTACCAGCAGATCGTGGTCATTCCTGACTACTTCAGCTGGACCCTGGCTTACAACACCGGTGCCGCGTT > 1:806286/1‑99 CAAGCTGTACTTCAACAACGCCCTGACCATGTACCAGCAGATCGTGGTCATTCCTGACTACTTCAGCTGGACCCTGGCTTACAACACCGGTGCCGCGTT < 2:806286/99‑1 CCCGCTCCGTCAGCCAGGAAGCTGAACGCGGCACCGGTGTTGTAAGCCAGGGTCCAGCTGAAGTAGTCAGGAATGACCACGATCTGCTGGTACATGGTCAGGGCGTTGTTGAAGTACAGCTTGGTGG‑CCTGGTCGATGACCAGGACCAGCAAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/713235‑713081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagctGTACTTCAACAACGCCCTGACCATGTACCAGCAGATCGTGGTCATTCCTGACTACTTCAGCTGGACCCTGGCTTACAACACCGGTGCCGCGTTCAGCTTCCTGGCTGACGGAGCGGGTTGGCAGCGCTGGTTGTTCGCCCTGAT > NC_002947/713119‑713262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |